--- /dev/null
+action.cancel = Cancel\r
+action.create = Create\r
+action.update = Update\r
+action.delete = Delete\r
+action.snapshot = Snapshot\r
+action.clear = Clear\r
+action.accept = Accept\r
+action.select_ddbb = --- Select Database ---\r
+action.undo = Undo\r
+action.redo = Redo\r
+action.reset = Reset\r
+action.remove_left = Remove left\r
+action.remove_right = Remove right\r
+action.remove_empty_columns = Remove Empty Columns\r
+action.remove_all_gaps = Remove All Gaps\r
+action.boxes = Boxes\r
+action.text = Text\r
+action.by_pairwise_id = by Pairwise Identity\r
+action.by_id = by Id\r
+action.by_length = by Length\r
+action.by_group = by Group\r
+action.remove_redundancy = Remove Redundancy...\r
+action.pairwise_alignment = Pairwise Alignments...\r
+action.by_rna_helixes = by RNA Helices\r
+action.user_defined = User Defined...\r
+action.by_conservation = By Conservation\r
+action.wrap = Wrap\r
+action.show_gaps = Show Gaps\r
+action.find = Find...\r
+action.undefine_groups = Undefine Groups\r
+action.make_groups_selection = Make Groups for selection\r
+action.copy = Copy\r
+action.cut = Cut\r
+action.paste = Paste\r
+action.font = Font...\r
+action.scale_above = Scale Above\r
+action.scale_left = Scale Left\r
+action.scale_right = Scale Right\r
+action.by_tree_order = By Tree Order\r
+action.sort = Sort\r
+action.calculate_tree = Calculate Tree\r
+action.help = Help\r
+action.by_annotation = by Annotation...\r
+action.invert_sequence_selection = Invert Sequence Selection\r
+action.invert_column_selection = Invert Column Selection\r
+action.show = Show\r
+action.hide = Hide\r
+action.ok = OK\r
+action.set_defaults = Defaults\r
+action.remove_group = Remove Group\r
+action.hide_sequences = Hide Sequences\r
+action.reveal_all = Reveal All\r
+action.reveal_sequences = Reveal Sequences\r
+action.find_all = Find all\r
+action.find_next = Find next\r
+action.file = File\r
+action.view = View\r
+action.change_params = Change Parameters\r
+action.apply = Apply\r
+action.apply_threshold_all_groups = Apply threshold to all groups\r
+action.apply_all_groups = Apply to all Groups\r
+action.by_chain = By chain\r
+action.by_sequence = By Sequence\r
+action.paste_annotations = Paste Annotations\r
+action.format = Format\r
+action.select = Select\r
+action.new_view = New View\r
+action.close = Close\r
+action.add = Add\r
+action.save_as_default = Save as default\r
+action.cancel_fetch = Cancel Fetch\r
+\r
+label.str = Str:\r
+label.seq = Seq:\r
+label.structures_manager = Structures Manager\r
+label.nickname = Nickname:\r
+label.url = URL:\r
+label.input_file_url = Enter URL or Input File\r
+label.select_feature = Select feature:\r
+label.name = Name:\r
+label.name_param = Name: {0}\r
+label.group = Group:\r
+label.colour = Colour:\r
+label.description = Description:\r
+label.start = Start:\r
+label.end = End:\r
+label.current_parameter_set_name = Current parameter set name:\r
+label.service_action = Service Action:\r
+label.post_url = POST URL:\r
+label.url_suffix = URL Suffix\r
+label.sequence_source = Sequence Source\r
+label.per_seq = per Sequence\r
+label.result_vertically_separable = Results are vertically separable\r
+label.amend = Amend\r
+label.undo_command = Undo {0}\r
+label.redo_command = Redo {0}\r
+label.principal_component_analysis = Principal Component Analysis\r
+label.average_distance_identity = Average Distance Using % Identity\r
+label.neighbour_joining_identity = Neighbour Joining Using % Identity\r
+label.status_bar = Status bar\r
+label.out_to_textbox = Output to Textbox\r
+label.clustalx = Clustalx\r
+label.zappo = Zappo\r
+label.taylor = Taylor\r
+label.hydrophobicity = Hydrophobicity\r
+label.helix_propensity = Helix Propensity\r
+label.strand_propensity = Strand Propensity\r
+label.turn_propensity = Turn Propensity\r
+label.buried_index = Buried Index\r
+label.purine_pyrimidine = Purine/Pyrimidine\r
+label.percentage_identity = Percentage Identity\r
+label.blosum62_score = BLOSUM62 Score\r
+label.tcoffee_scores = T-Coffee Scores\r
+label.average_distance_bloslum62 = Average Distance Using BLOSUM62\r
+label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62\r
+label.show_annotations = Show annotations\r
+label.colour_text = Colour Text\r
+label.show_non_conversed = Show nonconserved\r
+label.overview_window = Overview Window\r
+label.none = None\r
+label.above_identity_threshold = Above Identity Threshold\r
+label.nucleotide = Nucleotide\r
+label.to_new_alignment = To New Alignment\r
+label.to_this_alignment = Add To This Alignment\r
+label.apply_colour_to_all_groups = Apply Colour To All Groups\r
+label.modify_identity_thereshold = Modify Identity Threshold...\r
+label.modify_conservation_thereshold = Modify Conservation Threshold...\r
+label.input_from_textbox = Input from textbox\r
+label.centre_column_labels = Centre column labels\r
+label.automatic_scrolling = Automatic Scrolling\r
+label.documentation = Documentation\r
+label.about = About...\r
+label.show_sequence_limits = Show Sequence Limits\r
+label.feature_settings = Feature Settings...\r
+label.sequence_features = Sequence Features\r
+label.all_columns = All Columns\r
+label.all_sequences = All Sequences\r
+label.selected_columns = Selected Columns \r
+label.selected_sequences = Selected Sequences\r
+label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H)\r
+label.selected_region = Selected Region\r
+label.all_sequences_columns = All Sequences and Columns\r
+label.group_consensus = Group Consensus\r
+label.group_conservation = Group Conservation\r
+label.show_consensus_histogram = Show Consensus Histogram\r
+label.show_consensus_logo = Show Consensus Logo\r
+label.norm_consensus_logo = Normalise Consensus Logo\r
+label.apply_all_groups = Apply to all groups\r
+label.autocalculated_annotation = Autocalculated Annotation\r
+label.min_colour = Min Colour\r
+label.max_colour = Max Colour\r
+label.use_original_colours = Use Original Colours\r
+label.threshold_minmax = Threshold is min/max\r
+label.represent_group_with = Represent Group with\r
+label.selection = Selection\r
+label.group_colour = Group Colour\r
+label.sequence = Sequence\r
+label.view_pdb_structure = View PDB Structure\r
+label.min = Min:\r
+label.max = Max:\r
+label.colour_by_label = Colour by label\r
+label.new_feature = New Feature\r
+label.match_case = Match Case\r
+label.view_alignment_editor = View in alignment editor\r
+label.labels = Labels\r
+label.output_values = Output Values...\r
+label.input_data = Input Data...\r
+label.nucleotide_matrix = Nucleotide matrix\r
+label.protein_matrix = Protein matrix\r
+label.show_bootstrap_values = Show Bootstrap Values\r
+label.show_distances = Show distances\r
+label.mark_unassociated_leaves = Mark Unassociated Leaves\r
+label.fit_to_window = Fit To Window\r
+label.newick_format = Newick Format\r
+label.colours = Colours\r
+label.view_mapping = View Mapping\r
+label.wireframe = Wireframe\r
+label.depthcue = Depthcue\r
+label.z_buffering = Z Buffering\r
+label.charge_cysteine = Charge & Cysteine\r
+label.all_chains_visible = All Chains Visible\r
+label.successfully_added_features_alignment = Successfully added features to alignment\r
+label.keyboard_editing_mode = Keyboard editing mode is {0}\r
+label.paste_features_annotations_Tcoffee_here = Paste your features / annotations / T-coffee score file here.\r
+label.removed_columns = Removed {0} columns.\r
+label.removed_empty_columns = Removed {0} empty columns.\r
+label.paste_newick_tree_file = Paste your Newick tree file here.\r
+label.order_by_params = Order by {0}\r
+label.html_content = <html>{0}</html>\r
+label.paste_pdb_file= Paste your PDB file here.\r
+label.paste_pdb_file_for_sequence = Paste PDB file for sequence {0}\r
+label.could_not_parse_newick_file = Could not parse Newick file\!\n {0}\r
+label.successfully_pasted_tcoffee_scores_to_alignment= Successfully pasted T-Coffee scores to alignment.\r
+label.failed_add_tcoffee_scores = Failed to add T-Coffee scores: \r
+label.successfully_pasted_annotation_to_alignment= Successfully pasted annotation to alignment.\r
+label.successfully_pasted_alignment_file = Successfully pasted alignment file\r
+label.paste_your_alignment_file = Paste your alignment file here\r
+label.paste_your = Paste your\r
+label.finished_searching = Finished searching.\r
+label.search_results= Search results {0} : {1}\r
+label.found_match_for = Found match for {0}\r
+label.font = Font:\r
+label.size = Size:\r
+label.style = Style:\r
+label.enter_redundancy_threshold = Enter the redundancy threshold\r
+label.calculating = Calculating....\r
+label.modify_conservation_visibility = Modify conservation visibility\r
+label.colour_residues_above_occurence = Colour residues above % occurence\r
+label.set_this_label_text = set this label text\r
+label.sequences_from = Sequences from {0}\r
+label.successfully_loaded_file = Successfully loaded file {0}\r
+label.successfully_saved_to_file_in_format = Successfully saved to file: {0} in {1} format.\r
+label.copied_sequences_to_clipboard = Copied {0} sequences to clipboard.\r
+label.check_file_matches_sequence_ids_alignment = Check that the file matches sequence IDs in the alignment.\r
+label.problem_reading_tcoffee_score_file = Problem reading T-COFFEE score file\r
+label.source_to_target = {0} to '{1}'\r
+label.per_sequence_only= Per-sequence only\r
+label.to_file = to File\r
+label.to_textbox = to Textbox\r
+label.jalview = Jalview\r
+label.csv_spreadsheet = CSV (Spreadsheet)\r
+label.status = [Status]\r
+label.channels = Channels\r
+label.channel_title_item_count = {0} ({1})\r
+label.blog_item_published_on_date = {0} {1} \r
+label.select_das_service_from_table = Select a DAS service from the table to read a full description here.</font></html>\r
+label.session_update = Session Update\r
+label.new_vamsas_session = New Vamsas Session\r
+label.groovy_console = Groovy Console...\r
+label.lineart = Lineart\r
+label.dont_ask_me_again = Don't ask me again\r
+label.select_eps_character_rendering_style = Select EPS character rendering style\r
+label.invert_selection = Invert Selection\r
+label.optimise_order = Optimise Order\r
+label.seq_sort_by_score = Seq sort by Score\r
+label.load_colours = Load Colours\r
+label.save_colours = Save Colours\r
+label.fetch_das_features = Fetch DAS Features\r
+label.selected_database_to_fetch_from = Selected {0} database {1} to fetch from {2} \r
+label.database_param = Database: {0}\r
+label.example_param = Example: {0}\r
import jalview.appletgui.*;
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
public class AppletPDBViewer extends EmbmenuFrame implements
ActionListener, ItemListener
private void jbInit() throws Exception
{
setMenuBar(jMenuBar1);
- fileMenu.setLabel("File");
- coloursMenu.setLabel("Colours");
- mapping.setLabel("View Mapping");
+ fileMenu.setLabel(MessageManager.getString("action.file"));
+ coloursMenu.setLabel(MessageManager.getString("label.colours"));
+ mapping.setLabel(MessageManager.getString("label.view_mapping"));
mapping.addActionListener(this);
- wire.setLabel("Wireframe");
+ wire.setLabel(MessageManager.getString("label.wireframe"));
wire.addItemListener(this);
depth.setState(true);
- depth.setLabel("Depthcue");
+ depth.setLabel(MessageManager.getString("label.depthcue"));
depth.addItemListener(this);
zbuffer.setState(true);
- zbuffer.setLabel("Z Buffering");
+ zbuffer.setLabel(MessageManager.getString("label.z_buffering"));
zbuffer.addItemListener(this);
- charge.setLabel("Charge & Cysteine");
+ charge.setLabel(MessageManager.getString("label.charge_cysteine"));
charge.addActionListener(this);
- hydro.setLabel("Hydrophobicity");
+ hydro.setLabel(MessageManager.getString("label.hydrophobicity"));
hydro.addActionListener(this);
- chain.setLabel("By Chain");
+ chain.setLabel(MessageManager.getString("action.by_chain"));
chain.addActionListener(this);
- seqButton.setLabel("By Sequence");
+ seqButton.setLabel(MessageManager.getString("action.by_sequence"));
seqButton.addActionListener(this);
- allchains.setLabel("All Chains Visible");
+ allchains.setLabel(MessageManager.getString("label.all_chains_visible"));
allchains.addItemListener(this);
- viewMenu.setLabel("View");
- zappo.setLabel("Zappo");
+ viewMenu.setLabel(MessageManager.getString("action.view"));
+ zappo.setLabel(MessageManager.getString("label.zappo"));
zappo.addActionListener(this);
- taylor.setLabel("Taylor");
+ taylor.setLabel(MessageManager.getString("label.taylor"));
taylor.addActionListener(this);
- helix.setLabel("Helix Propensity");
+ helix.setLabel(MessageManager.getString("label.helix_propensity"));
helix.addActionListener(this);
- strand.setLabel("Strand Propensity");
+ strand.setLabel(MessageManager.getString("label.strand_propensity"));
strand.addActionListener(this);
- turn.setLabel("Turn Propensity");
+ turn.setLabel(MessageManager.getString("label.turn_propensity"));
turn.addActionListener(this);
- buried.setLabel("Buried Index");
+ buried.setLabel(MessageManager.getString("label.buried_index"));
buried.addActionListener(this);
- user.setLabel("User Defined...");
+ user.setLabel(MessageManager.getString("action.user_defined"));
user.addActionListener(this);
jMenuBar1.add(fileMenu);
jMenuBar1.add(coloursMenu);
import jalview.commands.*;
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
import jalview.util.UrlLink;
import jalview.io.AppletFormatAdapter;
import jalview.io.SequenceAnnotationReport;
if (sg != null && sg.getSize() > 0)
{
- editGroupName.setLabel("Name: " + sg.getName());
+ editGroupName.setLabel(MessageManager.formatMessage("label.name_param", new String[]{sg.getName()}));
showText.setState(sg.getDisplayText());
showColourText.setState(sg.getColourText());
showBoxes.setState(sg.getDisplayBoxes());
if (seq != null)
{
seqMenu.setLabel(seq.getName());
- repGroup.setLabel("Represent Group with " + seq.getName());
+ repGroup.setLabel(MessageManager.formatMessage("label.represent_group_with", new String[]{seq.getName()}));
}
else
{
jalview.bin.JalviewLite.addFrame(frame, "Sequence Details for "
+ (sequences.length == 1 ? sequences[0].getDisplayId(true)
: "Selection"), 600, 500);
- cap.setText("<html>" + contents.toString() + "</html>");
+ cap.setText(MessageManager.formatMessage("label.html_content", new String[]{contents.toString()}));
}
void editName()
else
{
CutAndPasteTransfer cap = new CutAndPasteTransfer(true, ap.alignFrame);
- cap.setText("Paste your PDB file here.");
+ cap.setText(MessageManager.getString("label.paste_pdb_file"));
cap.setPDBImport(seq);
Frame frame = new Frame();
frame.add(cap);
jalview.bin.JalviewLite.addFrame(frame,
- "Paste PDB file for sequence " + seq.getName(), 400, 300);
+ MessageManager.formatMessage("label.paste_pdb_file_for_sequence", new String[]{seq.getName()}), 400, 300);
}
}
private void jbInit() throws Exception
{
- groupMenu.setLabel("Group");
- groupMenu.setLabel("Selection");
+ groupMenu.setLabel(MessageManager.getString("label.group"));
+ groupMenu.setLabel(MessageManager.getString("label.selection"));
sequenceFeature.addActionListener(this);
editGroupName.addActionListener(this);
- unGroupMenuItem.setLabel("Remove Group");
+ unGroupMenuItem.setLabel(MessageManager.getString("action.remove_group"));
unGroupMenuItem.addActionListener(this);
- nucleotideMenuItem.setLabel("Nucleotide");
+ nucleotideMenuItem.setLabel(MessageManager.getString("label.nucleotide"));
nucleotideMenuItem.addActionListener(this);
conservationMenuItem.addItemListener(this);
abovePIDColour.addItemListener(this);
- colourMenu.setLabel("Group Colour");
- showBoxes.setLabel("Boxes");
+ colourMenu.setLabel(MessageManager.getString("label.group_colour"));
+ showBoxes.setLabel(MessageManager.getString("label.boxes"));
showBoxes.setState(true);
showBoxes.addItemListener(this);
sequenceName.addActionListener(this);
sequenceDetails.addActionListener(this);
selSeqDetails.addActionListener(this);
- displayNonconserved.setLabel("Show Nonconserved");
+ displayNonconserved.setLabel(MessageManager.getString("label.show_non_conversed"));
displayNonconserved.setState(false);
displayNonconserved.addItemListener(this);
- showText.setLabel("Text");
+ showText.setLabel(MessageManager.getString("label.text"));
showText.addItemListener(this);
- showColourText.setLabel("Colour Text");
+ showColourText.setLabel(MessageManager.getString("label.colour_text"));
showColourText.addItemListener(this);
- outputmenu.setLabel("Output to Textbox...");
- seqMenu.setLabel("Sequence");
- pdb.setLabel("View PDB Structure");
- hideSeqs.setLabel("Hide Sequences");
- repGroup.setLabel("Represent Group with");
- revealAll.setLabel("Reveal All");
- revealSeq.setLabel("Reveal Sequences");
- menu1.setLabel("Group");
+ outputmenu.setLabel(MessageManager.getString("label.out_to_textbox"));
+ seqMenu.setLabel(MessageManager.getString("label.sequence"));
+ pdb.setLabel(MessageManager.getString("label.view_pdb_structure"));
+ hideSeqs.setLabel(MessageManager.getString("action.hide_sequences"));
+ repGroup.setLabel(MessageManager.getString("label.represent_group_with"));
+ revealAll.setLabel(MessageManager.getString("action.reveal_all"));
+ revealSeq.setLabel(MessageManager.getString("action.reveal_sequences"));
+ menu1.setLabel(MessageManager.getString("label.group"));
add(groupMenu);
this.add(seqMenu);
this.add(hideSeqs);
import jalview.schemes.TurnColourScheme;
import jalview.schemes.ZappoColourScheme;
import jalview.structure.StructureSelectionManager;
+import jalview.util.MessageManager;
import java.awt.BorderLayout;
import java.awt.Canvas;
viewport.featureSettings.refreshTable();
}
alignPanel.paintAlignment(true);
- statusBar.setText("Successfully added features to alignment.");
+ statusBar.setText(MessageManager.getString("label.successfully_added_features_alignment"));
}
return featuresFile;
}
case KeyEvent.VK_F2:
viewport.cursorMode = !viewport.cursorMode;
- statusBar.setText("Keyboard editing mode is "
- + (viewport.cursorMode ? "on" : "off"));
+ statusBar.setText(MessageManager.formatMessage("label.keyboard_editing_mode", new String[]{(viewport.cursorMode ? "on" : "off")}));
if (viewport.cursorMode)
{
alignPanel.seqPanel.seqCanvas.cursorX = viewport.startRes;
public void loadAnnotations()
{
CutAndPasteTransfer cap = new CutAndPasteTransfer(true, this);
- cap.setText("Paste your features / annotations / T-coffee score file here.");
+ cap.setText(MessageManager.getString("label.paste_features_annotations_Tcoffee_here"));
cap.setAnnotationImport();
Frame frame = new Frame();
frame.add(cap);
- jalview.bin.JalviewLite.addFrame(frame, "Paste Annotations ", 400, 300);
+ jalview.bin.JalviewLite.addFrame(frame, MessageManager.getString("action.paste_annotations"), 400, 300);
}
{
undoMenuItem.setEnabled(true);
CommandI command = (CommandI) viewport.historyList.peek();
- undoMenuItem.setLabel("Undo " + command.getDescription());
+ undoMenuItem.setLabel(MessageManager.formatMessage("label.undo_command", new String[]{command.getDescription()}));
}
else
{
undoMenuItem.setEnabled(false);
- undoMenuItem.setLabel("Undo");
+ undoMenuItem.setLabel(MessageManager.getString("action.undo"));
}
if (viewport.redoList.size() > 0)
redoMenuItem.setEnabled(true);
CommandI command = (CommandI) viewport.redoList.peek();
- redoMenuItem.setLabel("Redo " + command.getDescription());
+ redoMenuItem.setLabel(MessageManager.formatMessage("label.redo_command", new String[]{command.getDescription()}));
}
else
{
redoMenuItem.setEnabled(false);
- redoMenuItem.setLabel("Redo");
+ redoMenuItem.setLabel(MessageManager.getString("action.redo"));
}
}
viewport.getSelectionGroup());
}
- statusBar.setText("Removed " + trimRegion.getSize() + " columns.");
-
+ statusBar.setText(MessageManager.formatMessage("label.removed_columns", new String[]{Integer.valueOf(trimRegion.getSize()).toString()}));
addHistoryItem(trimRegion);
for (SequenceGroup sg : viewport.getAlignment().getGroups())
addHistoryItem(removeGapCols);
- statusBar.setText("Removed " + removeGapCols.getSize()
- + " empty columns.");
+ statusBar.setText(MessageManager.formatMessage("label.removed_empty_columns", new String[]{Integer.valueOf(removeGapCols.getSize()).toString()}));
// This is to maintain viewport position on first residue
// of first sequence
void loadTree_actionPerformed()
{
CutAndPasteTransfer cap = new CutAndPasteTransfer(true, this);
- cap.setText("Paste your Newick tree file here.");
+ cap.setText(MessageManager.getString("label.paste_newick_tree_file"));
cap.setTreeImport();
Frame frame = new Frame();
frame.add(cap);
.sortByTree(viewport.getAlignment(), treePanel.getTree());
// addHistoryItem(new HistoryItem("Sort", viewport.alignment,
// HistoryItem.SORT));
- addHistoryItem(new OrderCommand("Order by " + title, oldOrder,
+ addHistoryItem(new OrderCommand(MessageManager.formatMessage("label.order_by_params", new String[]{title}), oldOrder,
viewport.getAlignment()));
alignPanel.paintAlignment(true);
}
selectAllSequenceMenuItem.addActionListener(this);
deselectAllSequenceMenuItem.addActionListener(this);
invertSequenceMenuItem.addActionListener(this);
- remove2LeftMenuItem.setLabel("Remove Left");
+ remove2LeftMenuItem.setLabel(MessageManager.getString("action.remove_left"));
remove2LeftMenuItem.addActionListener(this);
- remove2RightMenuItem.setLabel("Remove Right");
+ remove2RightMenuItem.setLabel(MessageManager.getString("action.remove_right"));
remove2RightMenuItem.addActionListener(this);
- removeGappedColumnMenuItem.setLabel("Remove Empty Columns");
+ removeGappedColumnMenuItem.setLabel(MessageManager.getString("action.remove_empty_columns"));
removeGappedColumnMenuItem.addActionListener(this);
- removeAllGapsMenuItem.setLabel("Remove All Gaps");
+ removeAllGapsMenuItem.setLabel(MessageManager.getString("action.remove_all_gaps"));
removeAllGapsMenuItem.addActionListener(this);
- viewBoxesMenuItem.setLabel("Boxes");
+ viewBoxesMenuItem.setLabel(MessageManager.getString("action.boxes"));
viewBoxesMenuItem.setState(true);
viewBoxesMenuItem.addItemListener(this);
- viewTextMenuItem.setLabel("Text");
+ viewTextMenuItem.setLabel(MessageManager.getString("action.text"));
viewTextMenuItem.setState(true);
viewTextMenuItem.addItemListener(this);
- sortPairwiseMenuItem.setLabel("by Pairwise Identity");
+ sortPairwiseMenuItem.setLabel(MessageManager.getString("action.by_pairwise_id"));
sortPairwiseMenuItem.addActionListener(this);
- sortIDMenuItem.setLabel("by ID");
+ sortIDMenuItem.setLabel(MessageManager.getString("action.by_id"));
sortIDMenuItem.addActionListener(this);
- sortLengthMenuItem.setLabel("by Length");
+ sortLengthMenuItem.setLabel(MessageManager.getString("action.by_length"));
sortLengthMenuItem.addActionListener(this);
- sortGroupMenuItem.setLabel("by Group");
+ sortGroupMenuItem.setLabel(MessageManager.getString("action.by_group"));
sortGroupMenuItem.addActionListener(this);
- removeRedundancyMenuItem.setLabel("Remove Redundancy...");
+ removeRedundancyMenuItem.setLabel(MessageManager.getString("action.remove_redundancy"));
removeRedundancyMenuItem.addActionListener(this);
- pairwiseAlignmentMenuItem.setLabel("Pairwise Alignments...");
+ pairwiseAlignmentMenuItem.setLabel(MessageManager.getString("action.pairwise_alignment"));
pairwiseAlignmentMenuItem.addActionListener(this);
- PCAMenuItem.setLabel("Principal Component Analysis");
+ PCAMenuItem.setLabel(MessageManager.getString("label.principal_component_analysis"));
PCAMenuItem.addActionListener(this);
averageDistanceTreeMenuItem
- .setLabel("Average Distance Using % Identity");
+ .setLabel(MessageManager.getString("label.average_distance_identity"));
averageDistanceTreeMenuItem.addActionListener(this);
- neighbourTreeMenuItem.setLabel("Neighbour Joining Using % Identity");
+ neighbourTreeMenuItem.setLabel(MessageManager.getString("label.neighbour_joining_identity"));
neighbourTreeMenuItem.addActionListener(this);
statusBar.setBackground(Color.white);
statusBar.setFont(new java.awt.Font("Verdana", 0, 11));
- statusBar.setText("Status bar");
- outputTextboxMenu.setLabel("Output to Textbox");
- clustalColour.setLabel("Clustalx");
+ statusBar.setText(MessageManager.getString("label.status_bar"));
+ outputTextboxMenu.setLabel(MessageManager.getString("label.out_to_textbox"));
+ clustalColour.setLabel(MessageManager.getString("label.clustalx"));
clustalColour.addActionListener(this);
- zappoColour.setLabel("Zappo");
+ zappoColour.setLabel(MessageManager.getString("label.zappo"));
zappoColour.addActionListener(this);
- taylorColour.setLabel("Taylor");
+ taylorColour.setLabel(MessageManager.getString("label.taylor"));
taylorColour.addActionListener(this);
- hydrophobicityColour.setLabel("Hydrophobicity");
+ hydrophobicityColour.setLabel(MessageManager.getString("label.hydrophobicity"));
hydrophobicityColour.addActionListener(this);
- helixColour.setLabel("Helix Propensity");
+ helixColour.setLabel(MessageManager.getString("label.helix_propensity"));
helixColour.addActionListener(this);
- strandColour.setLabel("Strand Propensity");
+ strandColour.setLabel(MessageManager.getString("label.strand_propensity"));
strandColour.addActionListener(this);
- turnColour.setLabel("Turn Propensity");
+ turnColour.setLabel(MessageManager.getString("label.turn_propensity"));
turnColour.addActionListener(this);
- buriedColour.setLabel("Buried Index");
+ buriedColour.setLabel(MessageManager.getString("label.buried_index"));
buriedColour.addActionListener(this);
- purinePyrimidineColour.setLabel("Purine/Pyrimidine");
+ purinePyrimidineColour.setLabel(MessageManager.getString("label.purine_pyrimidine"));
purinePyrimidineColour.addActionListener(this);
- RNAHelixColour.setLabel("by RNA Helices");
+ RNAHelixColour.setLabel(MessageManager.getString("action.by_rna_helixes"));
RNAHelixColour.addActionListener(this);
- userDefinedColour.setLabel("User Defined...");
+ userDefinedColour.setLabel(MessageManager.getString("action.user_defined"));
userDefinedColour.addActionListener(this);
- PIDColour.setLabel("Percentage Identity");
+ PIDColour.setLabel(MessageManager.getString("label.percentage_identity"));
PIDColour.addActionListener(this);
- BLOSUM62Colour.setLabel("BLOSUM62 Score");
+ BLOSUM62Colour.setLabel(MessageManager.getString("label.blosum62_score"));
BLOSUM62Colour.addActionListener(this);
- tcoffeeColour.setLabel("T-Coffee Scores");
+ tcoffeeColour.setLabel(MessageManager.getString("label.tcoffee_scores"));
tcoffeeColour.setEnabled(false); // it will enabled only if a score file is
// provided
tcoffeeColour.addActionListener(this);
avDistanceTreeBlosumMenuItem
- .setLabel("Average Distance Using BLOSUM62");
+ .setLabel(MessageManager.getString("label.average_distance_bloslum62"));
avDistanceTreeBlosumMenuItem.addActionListener(this);
- njTreeBlosumMenuItem.setLabel("Neighbour Joining Using BLOSUM62");
+ njTreeBlosumMenuItem.setLabel(MessageManager.getString("label.neighbour_blosum62"));
njTreeBlosumMenuItem.addActionListener(this);
- annotationPanelMenuItem.setLabel("Show Annotations");
+ annotationPanelMenuItem.setLabel(MessageManager.getString("label.show_annotations"));
annotationPanelMenuItem.addItemListener(this);
- colourTextMenuItem.setLabel("Colour Text");
+ colourTextMenuItem.setLabel(MessageManager.getString("label.colour_text"));
colourTextMenuItem.addItemListener(this);
- displayNonconservedMenuItem.setLabel("Show nonconserved");
+ displayNonconservedMenuItem.setLabel(MessageManager.getString("label.show_non_conversed"));
displayNonconservedMenuItem.addItemListener(this);
alProperties.addActionListener(this);
- overviewMenuItem.setLabel("Overview Window");
+ overviewMenuItem.setLabel(MessageManager.getString("label.overview_window"));
overviewMenuItem.addActionListener(this);
undoMenuItem.setEnabled(false);
- undoMenuItem.setLabel("Undo");
+ undoMenuItem.setLabel(MessageManager.getString("action.undo"));
undoMenuItem.addActionListener(this);
redoMenuItem.setEnabled(false);
- redoMenuItem.setLabel("Redo");
+ redoMenuItem.setLabel(MessageManager.getString("action.redo"));
redoMenuItem.addActionListener(this);
- conservationMenuItem.setLabel("by Conservation");
+ conservationMenuItem.setLabel(MessageManager.getString("action.by_conservation"));
conservationMenuItem.addItemListener(this);
- noColourmenuItem.setLabel("None");
+ noColourmenuItem.setLabel(MessageManager.getString("label.none"));
noColourmenuItem.addActionListener(this);
- wrapMenuItem.setLabel("Wrap");
+ wrapMenuItem.setLabel(MessageManager.getString("action.wrap"));
wrapMenuItem.addItemListener(this);
- renderGapsMenuItem.setLabel("Show Gaps");
+ renderGapsMenuItem.setLabel(MessageManager.getString("action.show_gaps"));
renderGapsMenuItem.setState(true);
renderGapsMenuItem.addItemListener(this);
- findMenuItem.setLabel("Find...");
+ findMenuItem.setLabel(MessageManager.getString("action.find"));
findMenuItem.addActionListener(this);
- abovePIDThreshold.setLabel("Above Identity Threshold");
+ abovePIDThreshold.setLabel(MessageManager.getString("label.above_identity_threshold"));
abovePIDThreshold.addItemListener(this);
- nucleotideColour.setLabel("Nucleotide");
+ nucleotideColour.setLabel(MessageManager.getString("label.nucleotide"));
nucleotideColour.addActionListener(this);
- deleteGroups.setLabel("Undefine Groups");
+ deleteGroups.setLabel(MessageManager.getString("action.undefine_groups"));
deleteGroups.addActionListener(this);
- grpsFromSelection.setLabel("Make Groups for selection");
+ grpsFromSelection.setLabel(MessageManager.getString("action.make_groups_selection"));
grpsFromSelection.addActionListener(this);
- copy.setLabel("Copy");
+ copy.setLabel(MessageManager.getString("action.copy"));
copy.addActionListener(this);
- cut.setLabel("Cut");
+ cut.setLabel(MessageManager.getString("action.cut"));
cut.addActionListener(this);
- delete.setLabel("Delete");
+ delete.setLabel(MessageManager.getString("action.delete"));
delete.addActionListener(this);
- pasteMenu.setLabel("Paste");
- pasteNew.setLabel("To New Alignment");
+ pasteMenu.setLabel(MessageManager.getString("action.paste"));
+ pasteNew.setLabel(MessageManager.getString("label.to_new_alignment"));
pasteNew.addActionListener(this);
- pasteThis.setLabel("Add To This Alignment");
+ pasteThis.setLabel(MessageManager.getString("label.to_this_alignment"));
pasteThis.addActionListener(this);
- applyToAllGroups.setLabel("Apply Colour To All Groups");
+ applyToAllGroups.setLabel(MessageManager.getString("label.apply_colour_to_all_groups"));
applyToAllGroups.setState(true);
applyToAllGroups.addItemListener(this);
- font.setLabel("Font...");
+ font.setLabel(MessageManager.getString("action.font"));
font.addActionListener(this);
- scaleAbove.setLabel("Scale Above");
+ scaleAbove.setLabel(MessageManager.getString("action.scale_above"));
scaleAbove.setState(true);
scaleAbove.setEnabled(false);
scaleAbove.addItemListener(this);
scaleLeft.setEnabled(false);
scaleLeft.setState(true);
- scaleLeft.setLabel("Scale Left");
+ scaleLeft.setLabel(MessageManager.getString("action.scale_left"));
scaleLeft.addItemListener(this);
scaleRight.setEnabled(false);
scaleRight.setState(true);
- scaleRight.setLabel("Scale Right");
+ scaleRight.setLabel(MessageManager.getString("action.scale_right"));
scaleRight.addItemListener(this);
- modifyPID.setLabel("Modify Identity Threshold...");
+ modifyPID.setLabel(MessageManager.getString("label.modify_identity_thereshold"));
modifyPID.addActionListener(this);
- modifyConservation.setLabel("Modify Conservation Threshold...");
+ modifyConservation.setLabel(MessageManager.getString("label.modify_conservation_thereshold"));
modifyConservation.addActionListener(this);
- sortByTreeMenu.setLabel("By Tree Order");
- sort.setLabel("Sort");
- calculate.setLabel("Calculate Tree");
+ sortByTreeMenu.setLabel(MessageManager.getString("action.by_tree_order"));
+ sort.setLabel(MessageManager.getString("action.sort"));
+ calculate.setLabel(MessageManager.getString("action.calculate_tree"));
autoCalculate.addItemListener(this);
sortByTree.addItemListener(this);
- inputText.setLabel("Input from textbox");
+ inputText.setLabel(MessageManager.getString("label.input_from_textbox"));
inputText.addActionListener(this);
- centreColumnLabelFlag.setLabel("Centre column labels");
+ centreColumnLabelFlag.setLabel(MessageManager.getString("label.centre_column_labels"));
centreColumnLabelFlag.addItemListener(this);
- followMouseOverFlag.setLabel("Automatic Scrolling");
+ followMouseOverFlag.setLabel(MessageManager.getString("label.automatic_scrolling"));
followMouseOverFlag.addItemListener(this);
- helpMenu.setLabel("Help");
- documentation.setLabel("Documentation");
+ helpMenu.setLabel(MessageManager.getString("action.help"));
+ documentation.setLabel(MessageManager.getString("label.documentation"));
documentation.addActionListener(this);
- about.setLabel("About...");
+ about.setLabel(MessageManager.getString("label.about"));
about.addActionListener(this);
seqLimits.setState(true);
- seqLimits.setLabel("Show Sequence Limits");
+ seqLimits.setLabel(MessageManager.getString("label.show_sequence_limits"));
seqLimits.addItemListener(this);
- featureSettings.setLabel("Feature Settings...");
+ featureSettings.setLabel(MessageManager.getString("label.feature_settings"));
featureSettings.addActionListener(this);
- sequenceFeatures.setLabel("Sequence Features");
+ sequenceFeatures.setLabel(MessageManager.getString("label.sequence_features"));
sequenceFeatures.addItemListener(this);
sequenceFeatures.setState(false);
- annotationColour.setLabel("by Annotation...");
+ annotationColour.setLabel(MessageManager.getString("action.by_annotation"));
annotationColour.addActionListener(this);
- invertSequenceMenuItem.setLabel("Invert Sequence Selection");
- invertColSel.setLabel("Invert Column Selection");
- menu1.setLabel("Show");
- showColumns.setLabel("All Columns ");
- showSeqs.setLabel("All Sequences");
- menu2.setLabel("Hide");
- hideColumns.setLabel("Selected Columns");
- hideSequences.setLabel("Selected Sequences");
- hideAllButSelection.setLabel("All but Selected Region (Shift+Ctrl+H)");
- hideAllSelection.setLabel("Selected Region");
- showAllHidden.setLabel("All Sequences and Columns");
- showGroupConsensus.setLabel("Group Consensus");
- showGroupConservation.setLabel("Group Conservation");
- showConsensusHistogram.setLabel("Show Consensus Histogram");
- showSequenceLogo.setLabel("Show Consensus Logo");
- normSequenceLogo.setLabel("Normalise Consensus Logo");
- applyAutoAnnotationSettings.setLabel("Apply to all groups");
+ invertSequenceMenuItem.setLabel(MessageManager.getString("action.invert_sequence_selection"));
+ invertColSel.setLabel(MessageManager.getString("action.invert_column_selection"));
+ menu1.setLabel(MessageManager.getString("action.show"));
+ showColumns.setLabel(MessageManager.getString("label.all_columns"));
+ showSeqs.setLabel(MessageManager.getString("label.all_sequences"));
+ menu2.setLabel(MessageManager.getString("aciton.hide"));
+ hideColumns.setLabel(MessageManager.getString("label.selected_columns"));
+ hideSequences.setLabel(MessageManager.getString("label.selected_sequences"));
+ hideAllButSelection.setLabel(MessageManager.getString("label.all_but_selected_region"));
+ hideAllSelection.setLabel(MessageManager.getString("label.selected_region"));
+ showAllHidden.setLabel(MessageManager.getString("label.all_sequences_columns"));
+ showGroupConsensus.setLabel(MessageManager.getString("label.group_consensus"));
+ showGroupConservation.setLabel(MessageManager.getString("label.group_conservation"));
+ showConsensusHistogram.setLabel(MessageManager.getString("label.show_consensus_histogram"));
+ showSequenceLogo.setLabel(MessageManager.getString("label.show_consensus_logo"));
+ normSequenceLogo.setLabel(MessageManager.getString("label.norm_consensus_logo"));
+ applyAutoAnnotationSettings.setLabel(MessageManager.getString("label.apply_all_groups"));
applyAutoAnnotationSettings.setState(true);
- autoAnnMenu.setLabel("Autocalculated Annotation");
+ autoAnnMenu.setLabel(MessageManager.getString("label.autocalculated_annotation"));
invertColSel.addActionListener(this);
showColumns.addActionListener(this);
normSequenceLogo.addItemListener(this);
applyAutoAnnotationSettings.addItemListener(this);
- formatMenu.setLabel("Format");
- selectMenu.setLabel("Select");
- newView.setLabel("New View");
+ formatMenu.setLabel(MessageManager.getString("action.format"));
+ selectMenu.setLabel(MessageManager.getString("action.select"));
+ newView.setLabel(MessageManager.getString("action.new_view"));
newView.addActionListener(this);
alignFrameMenuBar.add(fileMenu);
alignFrameMenuBar.add(editMenu);
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
public class AnnotationColourChooser extends Panel implements
ActionListener, AdjustmentListener, ItemListener, MouseListener
private void jbInit() throws Exception
{
minColour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
- minColour.setLabel("Min Colour");
+ minColour.setLabel(MessageManager.getString("label.min_colour"));
minColour.addActionListener(this);
maxColour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
- maxColour.setLabel("Max Colour");
+ maxColour.setLabel(MessageManager.getString("label.max_colour"));
maxColour.addActionListener(this);
thresholdIsMin.addItemListener(this);
- ok.setLabel("OK");
+ ok.setLabel(MessageManager.getString("action.ok"));
ok.addActionListener(this);
- cancel.setLabel("Cancel");
+ cancel.setLabel(MessageManager.getString("action.cancel"));
cancel.addActionListener(this);
- defColours.setLabel("Defaults");
+ defColours.setLabel(MessageManager.getString("action.set_defaults"));
defColours.addActionListener(this);
annotations.addItemListener(this);
thresholdValue.setEnabled(false);
thresholdValue.setColumns(5);
currentColours.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
- currentColours.setLabel("Use Original Colours");
+ currentColours.setLabel(MessageManager.getString("label.use_original_colours"));
currentColours.addItemListener(this);
thresholdIsMin.setBackground(Color.white);
- thresholdIsMin.setLabel("Threshold is min/max");
+ thresholdIsMin.setLabel(MessageManager.getString("label.threshold_minmax"));
this.setLayout(borderLayout1);
import jalview.datamodel.*;
import jalview.io.*;
import jalview.schemes.TCoffeeColourScheme;
+import jalview.util.MessageManager;
public class CutAndPasteTransfer extends Panel implements ActionListener,
MouseListener
public void setPDBImport(Sequence seq)
{
this.seq = seq;
- accept.setLabel("Accept");
+ accept.setLabel(MessageManager.getString("action.accept"));
addSequences.setVisible(false);
pdbImport = true;
}
public void setTreeImport()
{
treeImport = true;
- accept.setLabel("Accept");
+ accept.setLabel(MessageManager.getString("action.accept"));
addSequences.setVisible(false);
}
public void setAnnotationImport()
{
annotationImport = true;
- accept.setLabel("Accept");
+ accept.setLabel(MessageManager.getString("action.accept"));
addSequences.setVisible(false);
}
{
// TODO: JAL-1102 - should have a warning message in dialog, not simply
// overwrite the broken input data with the exception
- textarea.setText("Could not parse Newick file!\n" + ex);
+ textarea.setText(MessageManager.formatMessage("label.could_not_parse_newick_file", new String[]{ex.getMessage()}));
return;
}
}
alignFrame.changeColour(new TCoffeeColourScheme(
alignFrame.viewport.getAlignment()));
alignFrame.statusBar
- .setText("Successfully pasted T-Coffee scores to alignment.");
+ .setText(MessageManager.getString("label.successfully_pasted_tcoffee_scores_to_alignment"));
}
else
{
// file valid but didn't get added to alignment for some reason
- alignFrame.statusBar.setText("Failed to add T-Coffee scores: "
- + (tcf.getWarningMessage() != null ? tcf
- .getWarningMessage() : ""));
+ alignFrame.statusBar.setText(MessageManager.formatMessage("label.failed_add_tcoffee_scores", new String[]{(tcf.getWarningMessage() != null ? tcf.getWarningMessage() : "")}));
}
}
else
{
AlignFrame af = new AlignFrame(al, alignFrame.viewport.applet,
"Cut & Paste input - " + format, false);
- af.statusBar.setText("Successfully pasted alignment file");
+ af.statusBar.setText(MessageManager.getString("label.successfully_pasted_annotation_to_alignment"));
}
else
{
alignFrame.addSequences(al.getSequencesArray());
alignFrame.statusBar
- .setText("Successfully pasted alignment file");
+ .setText(MessageManager.getString("label.successfully_pasted_alignment_file"));
}
}
}
private void jbInit() throws Exception
{
textarea.setFont(new java.awt.Font("Monospaced", Font.PLAIN, 10));
- textarea.setText("Paste your alignment file here");
+ textarea.setText(MessageManager.getString("label.paste_your_alignment_file"));
textarea.addMouseListener(this);
this.setLayout(borderLayout1);
accept.addActionListener(this);
public void mousePressed(MouseEvent evt)
{
- if (textarea.getText().startsWith("Paste your"))
+ if (textarea.getText().startsWith(MessageManager.getString("label.paste_your")))
{
textarea.setText("");
}
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
public class FeatureColourChooser extends Panel implements ActionListener,
AdjustmentListener, ItemListener, MouseListener
private void jbInit() throws Exception
{
- Label minLabel = new Label("Min:"), maxLabel = new Label("Max:");
+ Label minLabel = new Label(MessageManager.getString("label.min")), maxLabel = new Label(MessageManager.getString("label.max"));
minLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
maxLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
// minColour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
jPanel3.setBackground(Color.white);
colourFromLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));
- colourFromLabel.setLabel("Colour by Label");
+ colourFromLabel.setLabel(MessageManager.getString("label.colour_by_label"));
colourFromLabel.setSize(new Dimension(139, 22));
// threshold.setBounds(new Rectangle(11, 3, 139, 22));
thresholdIsMin.setBackground(Color.white);
- thresholdIsMin.setLabel("Threshold is min/max");
+ thresholdIsMin.setLabel(MessageManager.getString("label.threshold_minmax"));
thresholdIsMin.setSize(new Dimension(135, 23));
// thresholdIsMin.setBounds(new Rectangle(328, 3, 135, 23));
jPanel1.add(minLabel);
import jalview.datamodel.*;
import jalview.schemes.AnnotationColourGradient;
import jalview.schemes.GraduatedColor;
+import jalview.util.MessageManager;
/**
* DOCUMENT ME!
}
else
{
- dialog.ok.setLabel("Amend");
+ dialog.ok.setLabel(MessageManager.getString("label.amend"));
dialog.buttonPanel.add(deleteButton, 1);
deleteButton.addActionListener(new ActionListener()
{
import java.awt.event.*;
import jalview.datamodel.*;
+import jalview.util.MessageManager;
public class Finder extends Panel implements ActionListener
{
// 'SelectRegion' selection
if (!haveResults)
{
- ap.alignFrame.statusBar.setText("Finished searching.");
+ ap.alignFrame.statusBar.setText(MessageManager.getString("label.finished_searching"));
resIndex = -1;
seqIndex = 0;
}
{
message += searchResults.getSize() + " subsequence matches.";
}
- ap.alignFrame.statusBar.setText("Search results: " + searchString
- + " : " + message);
+ ap.alignFrame.statusBar.setText(MessageManager.formatMessage("label.search_results", new String[] {searchString, message}));
}
else
{
// TODO: indicate sequence and matching position in status bar
- ap.alignFrame.statusBar.setText("Found match for " + searchString);
+ ap.alignFrame.statusBar.setText(MessageManager.formatMessage("label.found_match_for", new String[]{searchString}));
}
}
}
private void jbInit() throws Exception
{
jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));
- jLabel1.setText("Find");
+ jLabel1.setText(MessageManager.getString("action.find"));
jLabel1.setBounds(new Rectangle(3, 30, 34, 15));
this.setLayout(null);
textfield.setFont(new java.awt.Font("Verdana", Font.PLAIN, 10));
});
textfield.addActionListener(this);
findAll.setFont(new java.awt.Font("Verdana", Font.PLAIN, 10));
- findAll.setLabel("Find all");
+ findAll.setLabel(MessageManager.getString("action.find_all"));
findAll.addActionListener(this);
findNext.setEnabled(false);
findNext.setFont(new java.awt.Font("Verdana", Font.PLAIN, 10));
- findNext.setLabel("Find Next");
+ findNext.setLabel(MessageManager.getString("action.find_next"));
findNext.addActionListener(this);
jPanel1.setBounds(new Rectangle(180, 5, 141, 64));
jPanel1.setLayout(gridLayout1);
gridLayout1.setVgap(2);
createNewGroup.setEnabled(false);
createNewGroup.setFont(new java.awt.Font("Verdana", Font.PLAIN, 10));
- createNewGroup.setLabel("New Feature");
+ createNewGroup.setLabel(MessageManager.getString("label.new_feature"));
createNewGroup.addActionListener(this);
- caseSensitive.setLabel("Match Case");
+ caseSensitive.setLabel(MessageManager.getString("label.match_case"));
caseSensitive.setBounds(new Rectangle(40, 49, 126, 23));
jPanel1.add(findNext, null);
jPanel1.add(findAll, null);
*/
package jalview.appletgui;
+import jalview.util.MessageManager;
+
import java.awt.*;
import java.awt.event.*;
{
label1.setFont(new java.awt.Font("Verdana", 0, 11));
label1.setAlignment(Label.RIGHT);
- label1.setText("Font: ");
+ label1.setText(MessageManager.getString("label.font"));
this.setLayout(borderLayout4);
fontSize.setFont(new java.awt.Font("Verdana", 0, 11));
fontSize.addItemListener(this);
fontStyle.addItemListener(this);
label2.setAlignment(Label.RIGHT);
label2.setFont(new java.awt.Font("Verdana", 0, 11));
- label2.setText("Size: ");
+ label2.setText(MessageManager.getString("label.size"));
label3.setAlignment(Label.RIGHT);
label3.setFont(new java.awt.Font("Verdana", 0, 11));
- label3.setText("Style: ");
+ label3.setText(MessageManager.getString("label.style"));
fontName.setFont(new java.awt.Font("Verdana", 0, 11));
fontName.addItemListener(this);
ok.setFont(new java.awt.Font("Verdana", 0, 11));
- ok.setLabel("OK");
+ ok.setLabel(MessageManager.getString("action.ok"));
ok.addActionListener(this);
cancel.setFont(new java.awt.Font("Verdana", 0, 11));
- cancel.setLabel("Cancel");
+ cancel.setLabel(MessageManager.getString("action.cancel"));
cancel.addActionListener(this);
this.setBackground(Color.white);
panel1.setLayout(borderLayout1);
import java.awt.event.*;
import jalview.datamodel.*;
+import jalview.util.MessageManager;
import jalview.viewmodel.PCAModel;
public class PCAPanel extends EmbmenuFrame implements Runnable,
xCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
xCombobox.addItemListener(this);
resetButton.setFont(new java.awt.Font("Verdana", 0, 12));
- resetButton.setLabel("Reset");
+ resetButton.setLabel(MessageManager.getString("action.reset"));
resetButton.addActionListener(this);
this.setMenuBar(menuBar1);
- menu1.setLabel("File");
- menu2.setLabel("View");
- calcSettings.setLabel("Change Parameters");
- labels.setLabel("Labels");
+ menu1.setLabel(MessageManager.getString("action.file"));
+ menu2.setLabel(MessageManager.getString("action.view"));
+ calcSettings.setLabel(MessageManager.getString("action.change_params"));
+ labels.setLabel(MessageManager.getString("label.labels"));
labels.addItemListener(this);
- values.setLabel("Output Values...");
+ values.setLabel(MessageManager.getString("label.output_values"));
values.addActionListener(this);
- inputData.setLabel("Input Data...");
- nuclSetting.setLabel("Nucleotide matrix");
+ inputData.setLabel(MessageManager.getString("label.input_data"));
+ nuclSetting.setLabel(MessageManager.getString("label.nucleotide_matrix"));
nuclSetting.addItemListener(this);
- protSetting.setLabel("Protein matrix");
+ protSetting.setLabel(MessageManager.getString("label.protein_matrix"));
protSetting.addItemListener(this);
this.add(jPanel2, BorderLayout.SOUTH);
jPanel2.add(jLabel1, null);
import jalview.analysis.*;
import jalview.datamodel.*;
+import jalview.util.MessageManager;
public class PairwiseAlignPanel extends Panel implements ActionListener
{
textarea.setFont(new java.awt.Font("Monospaced", 0, 12));
textarea.setText("");
viewInEditorButton.setFont(new java.awt.Font("Verdana", 0, 12));
- viewInEditorButton.setLabel("View in alignment editor");
+ viewInEditorButton.setLabel(MessageManager.getString("label.view_alignment_editor"));
viewInEditorButton.addActionListener(this);
this.add(scrollPane, BorderLayout.CENTER);
scrollPane.add(textarea);
import jalview.analysis.AlignSeq;
import jalview.commands.*;
import jalview.datamodel.*;
+import jalview.util.MessageManager;
public class RedundancyPanel extends SliderPanel implements Runnable,
WindowListener
applyButton.setVisible(true);
allGroupsCheck.setVisible(false);
- label.setText("Enter the redundancy threshold");
+ label.setText(MessageManager.getString("label.enter_redundancy_threshold"));
valueField.setText("100");
slider.setVisibleAmount(1);
*/
public void run()
{
- label.setText("Calculating....");
+ label.setText(MessageManager.getString("label.calculating"));
slider.setVisible(false);
applyButton.setEnabled(false);
redundancy = AlignSeq.computeRedundancyMatrix(originalSequences,
omitHidden, start, end, false);
- label.setText("Enter the redundancy threshold");
+ label.setText(MessageManager.getString("label.enter_redundancy_threshold"));
slider.setVisible(true);
applyButton.setEnabled(true);
valueField.setVisible(true);
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
public class SliderPanel extends Panel implements ActionListener,
AdjustmentListener, MouseListener
applyButton.setVisible(false);
if (forConservation)
{
- label.setText("Modify conservation visibility");
+ label.setText(MessageManager.getString("label.modify_conservation_visibility"));
slider.setMinimum(0);
slider.setMaximum(50 + slider.getVisibleAmount());
slider.setUnitIncrement(1);
}
else
{
- label.setText("Colour residues above % occurence");
+ label.setText(MessageManager.getString("label.colour_residues_above_occurence"));
slider.setMinimum(0);
slider.setMaximum(100 + slider.getVisibleAmount());
slider.setBlockIncrement(1);
valueField.setText(" ");
valueField.addActionListener(this);
label.setFont(new java.awt.Font("Verdana", 0, 11));
- label.setText("set this label text");
+ label.setText(MessageManager.getString("label.set_this_label_text"));
jPanel1.setLayout(borderLayout1);
jPanel2.setLayout(flowLayout1);
applyButton.setFont(new java.awt.Font("Verdana", 0, 11));
- applyButton.setLabel("Apply");
+ applyButton.setLabel(MessageManager.getString("action.apply"));
applyButton.addActionListener(this);
undoButton.setEnabled(false);
undoButton.setFont(new java.awt.Font("Verdana", 0, 11));
- undoButton.setLabel("Undo");
+ undoButton.setLabel(MessageManager.getString("action.undo"));
undoButton.addActionListener(this);
allGroupsCheck.setEnabled(false);
allGroupsCheck.setFont(new java.awt.Font("Verdana", 0, 11));
- allGroupsCheck.setLabel("Apply threshold to all groups");
- allGroupsCheck.setName("Apply to all Groups");
+ allGroupsCheck.setLabel(MessageManager.getString("action.apply_threshold_all_groups"));
+ allGroupsCheck.setName(MessageManager.getString("action.apply_all_groups"));
this.setBackground(Color.white);
this.setForeground(Color.black);
jPanel2.add(label, null);
import jalview.analysis.*;
import jalview.datamodel.*;
import jalview.io.*;
+import jalview.util.MessageManager;
public class TreePanel extends EmbmenuFrame implements ActionListener,
ItemListener
setLayout(borderLayout1);
this.setBackground(Color.white);
this.setFont(new java.awt.Font("Verdana", 0, 12));
- jMenu2.setLabel("View");
- fontSize.setLabel("Font...");
+ jMenu2.setLabel(MessageManager.getString("action.view"));
+ fontSize.setLabel(MessageManager.getString("action.font"));
fontSize.addActionListener(this);
- bootstrapMenu.setLabel("Show Bootstrap Values");
+ bootstrapMenu.setLabel(MessageManager.getString("label.show_bootstrap_values"));
bootstrapMenu.addItemListener(this);
- distanceMenu.setLabel("Show Distances");
+ distanceMenu.setLabel(MessageManager.getString("label.show_distances"));
distanceMenu.addItemListener(this);
- placeholdersMenu.setLabel("Mark Unassociated Leaves");
+ placeholdersMenu.setLabel(MessageManager.getString("label.mark_unassociated_leaves"));
placeholdersMenu.addItemListener(this);
fitToWindow.setState(true);
- fitToWindow.setLabel("Fit To Window");
+ fitToWindow.setLabel(MessageManager.getString("label.fit_to_window"));
fitToWindow.addItemListener(this);
- fileMenu.setLabel("File");
- newickOutput.setLabel("Newick Format");
+ fileMenu.setLabel(MessageManager.getString("action.file"));
+ newickOutput.setLabel(MessageManager.getString("label.newick_format"));
newickOutput.addActionListener(this);
- inputData.setLabel("Input Data...");
+ inputData.setLabel(MessageManager.getString("label.input_data"));
add(scrollPane, BorderLayout.CENTER);
jMenuBar1.add(fileMenu);
import jalview.schemes.GraduatedColor;
import jalview.schemes.ResidueProperties;
import jalview.schemes.UserColourScheme;
+import jalview.util.MessageManager;
import java.awt.Button;
import java.awt.Color;
gridLayout.setColumns(6);
gridLayout.setRows(4);
okButton.setFont(new java.awt.Font("Verdana", 0, 11));
- okButton.setLabel("OK");
+ okButton.setLabel(MessageManager.getString("action.ok"));
okButton.addActionListener(this);
applyButton.setFont(new java.awt.Font("Verdana", 0, 11));
- applyButton.setLabel("Apply");
+ applyButton.setLabel(MessageManager.getString("action.apply"));
applyButton.addActionListener(this);
cancelButton.setFont(new java.awt.Font("Verdana", 0, 11));
- cancelButton.setLabel("Cancel");
+ cancelButton.setLabel(MessageManager.getString("action.cancel"));
cancelButton.addActionListener(this);
this.setBackground(new Color(212, 208, 223));
okcancelPanel.setBounds(new Rectangle(0, 265, 400, 35));
import jalview.javascript.JsCallBack;
import jalview.structure.SelectionListener;
import jalview.structure.StructureSelectionManager;
+import jalview.util.MessageManager;
import java.applet.Applet;
import java.awt.Button;
if (protocol == jalview.io.AppletFormatAdapter.PASTE)
{
- newAlignFrame.setTitle("Sequences from "
- + applet.getDocumentBase());
+ newAlignFrame.setTitle(MessageManager.formatMessage("label.sequences_from", new String[]{applet.getDocumentBase().toString()}));
}
- newAlignFrame.statusBar.setText("Successfully loaded file " + file);
+ newAlignFrame.statusBar.setText(MessageManager.formatMessage("label.successfully_loaded_file", new String []{file}));
String treeFile = applet.getParameter("tree");
if (treeFile == null)
import jalview.schemes.TurnColourScheme;
import jalview.schemes.UserColourScheme;
import jalview.schemes.ZappoColourScheme;
+import jalview.util.MessageManager;
import jalview.ws.jws1.Discoverer;
import jalview.ws.jws2.Jws2Discoverer;
import jalview.ws.seqfetcher.DbSourceProxy;
case KeyEvent.VK_F2:
viewport.cursorMode = !viewport.cursorMode;
- statusBar.setText("Keyboard editing mode is "
- + (viewport.cursorMode ? "on" : "off"));
+ statusBar.setText(MessageManager.formatMessage("label.keyboard_editing_mode", new String[]{(viewport.cursorMode ? "on" : "off")}));
if (viewport.cursorMode)
{
alignPanel.seqPanel.seqCanvas.cursorX = viewport.startRes;
final JPanel progressPanel = (JPanel) progressBars.get(new Long(id));
if (handler.canCancel())
{
- JButton cancel = new JButton("Cancel");
+ JButton cancel = new JButton(MessageManager.getString("action.cancel"));
final IProgressIndicator us = this;
cancel.addActionListener(new ActionListener()
{
success = new Jalview2XML().SaveAlignment(this, file, shortName);
- statusBar.setText("Successfully saved to file: " + fileName + " in "
- + format + " format.");
+ statusBar.setText(MessageManager.formatMessage("label.successfully_saved_to_file_in_format",new String[]{fileName, format}));
+
}
else
out.print(output);
out.close();
this.setTitle(file);
- statusBar.setText("Successfully saved to file: " + fileName
- + " in " + format + " format.");
+ statusBar.setText(MessageManager.formatMessage("label.successfully_saved_to_file_in_format",new String[]{fileName, format}));
} catch (Exception ex)
{
success = false;
{
undoMenuItem.setEnabled(true);
CommandI command = (CommandI) viewport.historyList.peek();
- undoMenuItem.setText("Undo " + command.getDescription());
+ undoMenuItem.setText(MessageManager.formatMessage("label.undo_command", new String[]{command.getDescription()}));
}
else
{
undoMenuItem.setEnabled(false);
- undoMenuItem.setText("Undo");
+ undoMenuItem.setText(MessageManager.getString("action.undo"));
}
if (viewport.redoList.size() > 0)
redoMenuItem.setEnabled(true);
CommandI command = (CommandI) viewport.redoList.peek();
- redoMenuItem.setText("Redo " + command.getDescription());
+ redoMenuItem.setText(MessageManager.formatMessage("label.redo_command", new String[]{command.getDescription()}));
}
else
{
redoMenuItem.setEnabled(false);
- redoMenuItem.setText("Redo");
+ redoMenuItem.setText(MessageManager.getString("action.redo"));
}
}
Desktop.jalviewClipboard = new Object[]
{ seqs, viewport.getAlignment().getDataset(), hiddenColumns };
- statusBar.setText("Copied " + seqs.length + " sequences to clipboard.");
+ statusBar.setText(MessageManager.formatMessage("label.copied_sequences_to_clipboard", new String[]{Integer.valueOf(seqs.length).toString()}));
}
/**
viewport.getSelectionGroup());
}
- statusBar.setText("Removed " + trimRegion.getSize() + " columns.");
+ statusBar.setText(MessageManager.formatMessage("label.removed_columns", new String[]{Integer.valueOf(trimRegion.getSize()).toString()}));
addHistoryItem(trimRegion);
addHistoryItem(removeGapCols);
- statusBar.setText("Removed " + removeGapCols.getSize()
- + " empty columns.");
+ statusBar.setText(MessageManager.formatMessage("label.removed_empty_columns", new String[]{Integer.valueOf(removeGapCols.getSize()).toString()}));
// This is to maintain viewport position on first residue
// of first sequence
editPane.setEditable(false);
StringBuffer contents = new AlignmentProperties(viewport.getAlignment())
.formatAsHtml();
- editPane.setText("<html>" + contents.toString() + "</html>");
+ editPane.setText(MessageManager.formatMessage("label.html_content", new String[]{contents.toString()}));
JInternalFrame frame = new JInternalFrame();
frame.getContentPane().add(new JScrollPane(editPane));
tcoffeeColour.setSelected(true);
changeColour(new TCoffeeColourScheme(viewport.getAlignment()));
isAnnotation = true;
- statusBar
- .setText("Successfully pasted T-Coffee scores to alignment.");
+ statusBar.setText(MessageManager.getString("label.successfully_pasted_tcoffee_scores_to_alignment"));
}
else
{
JOptionPane
.showMessageDialog(
Desktop.desktop,
- tcf.getWarningMessage() == null ? "Check that the file matches sequence IDs in the alignment."
+ tcf.getWarningMessage() == null ? MessageManager.getString("label.check_file_matches_sequence_ids_alignment")
: tcf.getWarningMessage(),
- "Problem reading T-COFFEE score file",
+ MessageManager.getString("label.problem_reading_tcoffee_score_file"),
JOptionPane.WARNING_MESSAGE);
}
}
++i;
if (++icomp >= mcomp || i == (otherdb.size()))
{
- ifetch.setText(imname + " to '" + sname + "'");
+ ifetch.setText(MessageManager.formatMessage("label.source_to_target",new String[]{imname,sname}));
dfetch.add(ifetch);
ifetch = new JMenu();
imname = null;
++dbi;
if (comp >= mcomp || dbi >= (dbclasses.length))
{
- dfetch.setText(mname + " to '" + dbclass + "'");
+ dfetch.setText(MessageManager.formatMessage("label.source_to_target",new String[]{mname,dbclass}));
rfetch.add(dfetch);
dfetch = new JMenu();
mname = null;
import jalview.bin.Cache;
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
+
import java.awt.Dimension;
public class AnnotationColourChooser extends JPanel
}
});
ok.setOpaque(false);
- ok.setText("OK");
+ ok.setText(MessageManager.getString("action.ok"));
ok.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
cancel.setOpaque(false);
- cancel.setText("Cancel");
+ cancel.setText(MessageManager.getString("action.cancel"));
cancel.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
defColours.setOpaque(false);
- defColours.setText("Defaults");
+ defColours.setText(MessageManager.getString("action.set_defaults"));
defColours
.setToolTipText("Reset min and max colours to defaults from user preferences.");
defColours.addActionListener(new ActionListener()
thresholdValue.setColumns(7);
currentColours.setFont(JvSwingUtils.getLabelFont());
currentColours.setOpaque(false);
- currentColours.setText("Use Original Colours");
+ currentColours.setText(MessageManager.getString("label.use_original_colours"));
currentColours.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
});
thresholdIsMin.setBackground(Color.white);
thresholdIsMin.setFont(JvSwingUtils.getLabelFont());
- thresholdIsMin.setText("Threshold is Min/Max");
+ thresholdIsMin.setText(MessageManager.getString("label.threshold_minmax"));
thresholdIsMin.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent actionEvent)
});
seqAssociated.setBackground(Color.white);
seqAssociated.setFont(JvSwingUtils.getLabelFont());
- seqAssociated.setText("Per-sequence only");
+ seqAssociated.setText(MessageManager.getString("label.per_sequence_only"));
seqAssociated.addActionListener(new ActionListener()
{
import jalview.datamodel.*;
import jalview.io.*;
+import jalview.util.MessageManager;
/**
*
{
this.setLayout(new BorderLayout());
- toFile.setText("to File");
+ toFile.setText(MessageManager.getString("label.to_file"));
toFile.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
toFile_actionPerformed(e);
}
});
- toTextbox.setText("to Textbox");
+ toTextbox.setText(MessageManager.getString("label.to_textbox"));
toTextbox.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
toTextbox_actionPerformed(e);
}
});
- close.setText("Close");
+ close.setText(MessageManager.getString("action.close"));
close.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
GFFFormat.setOpaque(false);
GFFFormat.setText("GFF");
CSVFormat.setOpaque(false);
- CSVFormat.setText("CSV(Spreadsheet)");
+ CSVFormat.setText(MessageManager.getString("label.csv_spreadsheet"));
jLabel1.setHorizontalAlignment(SwingConstants.TRAILING);
- jLabel1.setText("Format: ");
+ jLabel1.setText(MessageManager.getString("action.format") + " ");
this.setBackground(Color.white);
jPanel3.setBorder(BorderFactory.createEtchedBorder());
jPanel3.setOpaque(false);
*/
package jalview.gui;
+import jalview.util.MessageManager;
+
import java.awt.BorderLayout;
import java.awt.Color;
import java.awt.Component;
private JTextField _seq = new JTextField();
- private JLabel _strLabel = new JLabel(" Str:");
+ private JLabel _strLabel = new JLabel(MessageManager.getString("label.str"));
- private JLabel _seqLabel = new JLabel(" Seq:");
+ private JLabel _seqLabel = new JLabel(MessageManager.getString("label.seq"));
- private JButton _createButton = new JButton("Create");
+ private JButton _createButton = new JButton(MessageManager.getString("action.create"));
- private JButton _updateButton = new JButton("Update");
+ private JButton _updateButton = new JButton(MessageManager.getString("action.update"));
- private JButton _deleteButton = new JButton("Delete");
+ private JButton _deleteButton = new JButton(MessageManager.getString("action.delete"));
- private JButton _duplicateButton = new JButton("Snapshot");
+ private JButton _duplicateButton = new JButton(MessageManager.getString("action.snapshot"));
protected JPanel _listPanel = new JPanel();
ops.add(_deleteButton);
ops.add(_duplicateButton);
- JLabel j = new JLabel("Structures Manager", JLabel.CENTER);
+ JLabel j = new JLabel(MessageManager.getString("label.structures_manager"), JLabel.CENTER);
_listPanel.setLayout(new BorderLayout());
// _listPanel.add(ops, BorderLayout.SOUTH);
package jalview.gui;
import jalview.bin.Cache;
+import jalview.util.MessageManager;
+
import java.awt.BorderLayout;
import java.awt.Component;
import java.awt.Dimension;
topBottomSplitPane.setBottomComponent(bottomPanel);
JScrollPane spTextDescription = new JScrollPane(textDescription);
textDescription.setText("");
- statusBar.setText(" [Status] ");
+ statusBar.setText(MessageManager.getString("label.status"));
buttonRefresh.addActionListener(new ActionListener()
{
_popupChannels);
listItems.addMouseListener(popupAdapter);
listItems.setCellRenderer(new ItemsRenderer());
- lblChannels.setText("Channels");
+ lblChannels.setText(MessageManager.getString("label.channels"));
}
private void postInit()
if (value instanceof Channel)
{
Channel channel = (Channel) value;
- component.setText(channel.getTitle() + " ("
- + channel.getUnreadItemCount() + ")");
+ component.setText(MessageManager.formatMessage("label.channel_title_item_count", new String[]{channel.getTitle(),Integer.valueOf(channel.getUnreadItemCount()).toString()}));
component.setToolTipText(channel.getURL());
}
return component;
Item item = (Item) value;
if (item.getPublishDate() != null)
{
- component.setText(DateFormat.getDateInstance().format(
- item.getPublishDate())
- + " " + item.getTitle());
+ component.setText(MessageManager.formatMessage("label.blog_item_published_on_date", new String[]{DateFormat.getDateInstance().format(item.getPublishDate()).toString(),item.getTitle()}));
}
component.setToolTipText(item.getLink());
if (!item.isRead())
*/
package jalview.gui;
+import jalview.util.MessageManager;
+
import java.io.*;
import java.awt.*;
import java.awt.event.*;
// textArea = cpt.getTextArea();
textArea = new JTextArea();
textArea.setEditable(false);
- JButton button = new JButton("clear");
+ JButton button = new JButton(MessageManager.getString("action.clear"));
// frame = cpt;
frame.getContentPane().setLayout(new BorderLayout());
import jalview.io.*;
import jalview.jbgui.*;
+import jalview.util.MessageManager;
/**
* Cut'n'paste files into the desktop See JAL-1105
this.viewport = viewport;
if (viewport != null)
{
- ok.setText("Add");
+ ok.setText(MessageManager.getString("action.add"));
}
getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);
import jalview.datamodel.*;
import jalview.io.*;
import jalview.jbgui.*;
+import jalview.util.MessageManager;
/**
* Cut'n'paste files into the desktop See JAL-1105
this.viewport = viewport;
if (viewport != null)
{
- ok.setText("Add");
+ ok.setText(MessageManager.getString("action.add"));
}
getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);
af.currentFileFormat = format;
Desktop.addInternalFrame(af, "Cut & Paste input - " + format,
AlignFrame.DEFAULT_WIDTH, AlignFrame.DEFAULT_HEIGHT);
- af.statusBar.setText("Successfully pasted alignment file");
+ af.statusBar.setText(MessageManager.getString("label.successfully_pasted_alignment_file"));
try
{
package jalview.gui;
import jalview.jbgui.GDasSourceBrowser;
+import jalview.util.MessageManager;
import jalview.util.TableSorter;
import jalview.ws.dbsources.das.api.DasSourceRegistryI;
import jalview.ws.dbsources.das.api.jalviewSourceI;
if (nickName == null)
{
- fullDetails.setText(text + "Select a DAS service from the table"
- + " to read a full description here.</font></html>");
+ fullDetails.setText(text + MessageManager.getString("label.select_das_service_from_table"));
return;
}
JTextField nametf = new JTextField(nickname, 40);
JTextField urltf = new JTextField(url, 40);
- JCheckBox seqs = new JCheckBox("Sequence Source");
+ JCheckBox seqs = new JCheckBox(MessageManager.getString("label.sequence_source"));
seqs.setSelected(seqsrc);
JPanel panel = new JPanel(new BorderLayout());
JPanel pane12 = new JPanel(new BorderLayout());
- pane12.add(new JLabel("Nickname: "), BorderLayout.CENTER);
+ pane12.add(new JLabel(MessageManager.getString("label.structure_manager")), BorderLayout.CENTER);
pane12.add(nametf, BorderLayout.EAST);
panel.add(pane12, BorderLayout.NORTH);
pane12 = new JPanel(new BorderLayout());
- pane12.add(new JLabel("URL: "), BorderLayout.NORTH);
+ pane12.add(new JLabel(MessageManager.getString("label.url")), BorderLayout.NORTH);
pane12.add(seqs, BorderLayout.SOUTH);
pane12.add(urltf, BorderLayout.EAST);
panel.add(pane12, BorderLayout.SOUTH);
import jalview.io.IdentifyFile;
import jalview.io.JalviewFileChooser;
import jalview.io.JalviewFileView;
+import jalview.util.MessageManager;
import jalview.ws.params.ParamManager;
import java.awt.BorderLayout;
{
// This construct allows us to have a wider textfield
// for viewing
- JLabel label = new JLabel("Enter URL of Input File");
+ JLabel label = new JLabel(MessageManager.getString("label.input_file_url"));
final JComboBox history = new JComboBox();
JPanel panel = new JPanel(new GridLayout(2, 1));
protected void setupVamsasConnectedGui()
{
- vamsasStart.setText("Session Update");
+ vamsasStart.setText(MessageManager.getString("label.session_update"));
vamsasSave.setVisible(true);
vamsasStop.setVisible(true);
vamsasImport.setVisible(false); // Document import to existing session is
vamsasSave.setVisible(false);
vamsasStop.setVisible(false);
vamsasImport.setVisible(true);
- vamsasStart.setText("New Vamsas Session");
+ vamsasStart.setText(MessageManager.getString("label.new_vamsas_session"));
}
public void vamsasStop_actionPerformed(ActionEvent e)
if (jalview.bin.Cache.groovyJarsPresent())
{
groovyShell = new JMenuItem();
- groovyShell.setText("Groovy Console...");
+ groovyShell.setText(MessageManager.getString("label.groovy_console"));
groovyShell.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
final JPanel progressPanel = (JPanel) progressBars.get(new Long(id));
if (handler.canCancel())
{
- JButton cancel = new JButton("Cancel");
+ JButton cancel = new JButton(MessageManager.getString("action.cancel"));
final IProgressIndicator us = this;
cancel.addActionListener(new ActionListener()
{
*/
package jalview.gui;
+import jalview.util.MessageManager;
+
import java.awt.*;
import java.awt.event.*;
import javax.swing.*;
private void jbInit() throws Exception
{
lineart.setFont(JvSwingUtils.getLabelFont());
- lineart.setText("Lineart");
+ lineart.setText(MessageManager.getString("label.lineart"));
text.setFont(JvSwingUtils.getLabelFont());
- text.setText("Text");
+ text.setText(MessageManager.getString("action.text"));
text.setSelected(true);
askAgain.setFont(JvSwingUtils.getLabelFont());
- askAgain.setText("Don\'t ask me again");
- ok.setText("OK");
+ askAgain.setText(MessageManager.getString("label.dont_ask_me_again"));
+ ok.setText(MessageManager.getString("action.ok"));
ok.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
ok_actionPerformed(e);
}
});
- cancel.setText("Cancel");
+ cancel.setText(MessageManager.getString("action.cancel"));
cancel.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
jLabel1.setFont(JvSwingUtils.getLabelFont());
- jLabel1.setText("Select EPS character rendering style");
+ jLabel1.setText(MessageManager.getString("label.select_eps_character_rendering_style"));
this.setLayout(borderLayout1);
jPanel3.setBorder(BorderFactory.createEtchedBorder());
jPanel2.add(text);
*/
package jalview.gui;
+import jalview.util.MessageManager;
+
import java.awt.*;
import javax.swing.*;
{
JTextField id, description;
- JButton ok = new JButton("Accept");
+ JButton ok = new JButton(MessageManager.getString("action.accept"));
- JButton cancel = new JButton("Cancel");
+ JButton cancel = new JButton(MessageManager.getString("action.cancel"));
boolean accept = false;
import jalview.datamodel.*;
import jalview.schemes.*;
+import jalview.util.MessageManager;
+
import java.awt.Dimension;
public class FeatureColourChooser extends JalviewDialog
}
});
maxColour.setBorder(new LineBorder(Color.black));
- minText.setText("Min:");
+ minText.setText(MessageManager.getString("label.min"));
minText.setFont(JvSwingUtils.getLabelFont());
- maxText.setText("Max:");
+ maxText.setText(MessageManager.getString("label.max"));
maxText.setFont(JvSwingUtils.getLabelFont());
this.setLayout(borderLayout1);
jPanel2.setLayout(flowLayout1);
thresholdValue.setColumns(7);
jPanel3.setBackground(Color.white);
thresholdIsMin.setBackground(Color.white);
- thresholdIsMin.setText("Threshold is Min/Max");
+ thresholdIsMin.setText(MessageManager.getString("label.threshold_minmax"));
thresholdIsMin
.setToolTipText("Toggle between absolute and relative display threshold.");
thresholdIsMin.addActionListener(new ActionListener()
}
});
colourByLabel.setBackground(Color.white);
- colourByLabel.setText("Colour by Label");
+ colourByLabel.setText(MessageManager.getString("label.colour_by_label"));
colourByLabel
.setToolTipText("Display features of the same type with a different label using a different colour. (e.g. domain features)");
colourByLabel.addActionListener(new ActionListener()
import jalview.datamodel.*;
import jalview.schemes.GraduatedColor;
+import jalview.util.MessageManager;
/**
* DOCUMENT ME!
{
panel = new JPanel(new GridLayout(4, 1));
tmp = new JPanel();
- tmp.add(new JLabel("Select Feature: "));
+ tmp.add(new JLabel(MessageManager.getString("label.select_feature")));
overlaps = new JComboBox();
for (int i = 0; i < features.length; i++)
{
tmp = new JPanel();
panel.add(tmp);
- tmp.add(new JLabel("Name: ", JLabel.RIGHT));
+ tmp.add(new JLabel(MessageManager.getString("label.name"), JLabel.RIGHT));
tmp.add(name);
tmp = new JPanel();
panel.add(tmp);
- tmp.add(new JLabel("Group: ", JLabel.RIGHT));
+ tmp.add(new JLabel(MessageManager.getString("label.group"), JLabel.RIGHT));
tmp.add(source);
tmp = new JPanel();
panel.add(tmp);
- tmp.add(new JLabel("Colour: ", JLabel.RIGHT));
+ tmp.add(new JLabel(MessageManager.getString("label.colour"), JLabel.RIGHT));
tmp.add(colour);
colour.setPreferredSize(new Dimension(150, 15));
colour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 9));
bigPanel.add(panel, BorderLayout.NORTH);
panel = new JPanel();
- panel.add(new JLabel("Description: ", JLabel.RIGHT));
+ panel.add(new JLabel(MessageManager.getString("label.description"), JLabel.RIGHT));
description.setFont(JvSwingUtils.getTextAreaFont());
description.setLineWrap(true);
panel.add(new JScrollPane(description));
bigPanel.add(panel, BorderLayout.SOUTH);
panel = new JPanel();
- panel.add(new JLabel(" Start:", JLabel.RIGHT));
+ panel.add(new JLabel(MessageManager.getString("label.start"), JLabel.RIGHT));
panel.add(start);
- panel.add(new JLabel(" End:", JLabel.RIGHT));
+ panel.add(new JLabel(MessageManager.getString("label.end"), JLabel.RIGHT));
panel.add(end);
bigPanel.add(panel, BorderLayout.CENTER);
}
import jalview.io.*;
import jalview.schemes.AnnotationColourGradient;
import jalview.schemes.GraduatedColor;
+import jalview.util.MessageManager;
import jalview.ws.dbsources.das.api.jalviewSourceI;
public class FeatureSettings extends JPanel
dasSettingsPane.setLayout(borderLayout3);
bigPanel.setLayout(borderLayout4);
invert.setFont(JvSwingUtils.getLabelFont());
- invert.setText("Invert Selection");
+ invert.setText(MessageManager.getString("label.invert_selection"));
invert.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
optimizeOrder.setFont(JvSwingUtils.getLabelFont());
- optimizeOrder.setText("Optimise Order");
+ optimizeOrder.setText(MessageManager.getString("label.optimise_order"));
optimizeOrder.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
sortByScore.setFont(JvSwingUtils.getLabelFont());
- sortByScore.setText("Seq sort by Score");
+ sortByScore.setText(MessageManager.getString("label.seq_sort_by_score"));
sortByScore.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
cancel.setFont(JvSwingUtils.getLabelFont());
- cancel.setText("Cancel");
+ cancel.setText(MessageManager.getString("action.cancel"));
cancel.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
ok.setFont(JvSwingUtils.getLabelFont());
- ok.setText("OK");
+ ok.setText(MessageManager.getString("action.ok"));
ok.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
loadColours.setFont(JvSwingUtils.getLabelFont());
- loadColours.setText("Load Colours");
+ loadColours.setText(MessageManager.getString("label.load_colours"));
loadColours.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
saveColours.setFont(JvSwingUtils.getLabelFont());
- saveColours.setText("Save Colours");
+ saveColours.setText(MessageManager.getString("label.save_colours"));
saveColours.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
});
transparency.setMaximum(70);
- fetchDAS.setText("Fetch DAS Features");
+ fetchDAS.setText(MessageManager.getString("label.fetch_das_features"));
fetchDAS.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
fetchDAS_actionPerformed(e);
}
});
- saveDAS.setText("Save as default");
+ saveDAS.setText(MessageManager.getString("action.save_as_default"));
saveDAS.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
dasButtonPanel.setBorder(BorderFactory.createEtchedBorder());
dasSettingsPane.setBorder(null);
cancelDAS.setEnabled(false);
- cancelDAS.setText("Cancel Fetch");
+ cancelDAS.setText(MessageManager.getString("action.cancel_fetch"));
cancelDAS.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
package jalview.gui;
import jalview.bin.Cache;
+import jalview.util.MessageManager;
import jalview.ws.seqfetcher.DbSourceProxy;
import java.awt.BorderLayout;
JButton getDatabaseSelectorButton()
{
- final JButton viewdbs = new JButton("--- Select Database ---");
+ final JButton viewdbs = new JButton(MessageManager.getString("action.select_ddbb"));
viewdbs.addActionListener(new ActionListener()
{
if (allowMultiSelections)
{
- dbstatus.setText("Selected "
- + srcs.size()
- + " database"
- + (srcs.size() == 1 ? "" : "s")
- + " to fetch from"
- + (srcs.size() > 0 ? " with " + x + " test quer"
- + (x == 1 ? "y" : "ies") : "."));
+ dbstatus.setText(MessageManager.formatMessage("label.selected_database_to_fetch_from", new String[]{Integer.valueOf(srcs.size()).toString(),(srcs.size() == 1 ? "" : "s"),(srcs.size() > 0 ? " with " + x + " test quer" + (x == 1 ? "y" : "ies") : ".")}));
dbstatex.setText(" ");
}
else
{
if (nm.length() > 0)
{
- dbstatus.setText("Database: " + nm);
+ dbstatus.setText(MessageManager.formatMessage("label.database_param",new String[]{nm}));
if (qr.length() > 0)
{
- dbstatex.setText("Example: " + qr);
+ dbstatex.setText(MessageManager.formatMessage("label.example_param", new String[]{qr}));
}
else
{
*/
package jalview.gui;
+import jalview.util.MessageManager;
+
import java.awt.Container;
import java.awt.Rectangle;
import java.awt.event.ActionEvent;
this.block = block;
ok.setOpaque(false);
- ok.setText("OK");
+ ok.setText(MessageManager.getString("action.ok"));
ok.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
cancel.setOpaque(false);
- cancel.setText("Cancel");
+ cancel.setText(MessageManager.getString("action.cancel"));
cancel.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
import jalview.datamodel.*;
import jalview.jbgui.*;
+import jalview.util.MessageManager;
import jalview.viewmodel.PCAModel;
/**
final JPanel progressPanel = (JPanel) progressBars.get(new Long(id));
if (handler.canCancel())
{
- JButton cancel = new JButton("Cancel");
+ JButton cancel = new JButton(MessageManager.getString("action.cancel"));
final IProgressIndicator us = this;
cancel.addActionListener(new ActionListener()
{
import javax.swing.text.html.StyleSheet;
import jalview.jbgui.*;
+import jalview.util.MessageManager;
import jalview.ws.WSClientI;
/**
final JPanel progressPanel = (JPanel) progressBars.get(new Long(id));
if (handler.canCancel())
{
- JButton cancel = new JButton("Cancel");
+ JButton cancel = new JButton(MessageManager.getString("action.cancel"));
final IProgressIndicator us = this;
cancel.addActionListener(new ActionListener()
{
import jalview.gui.OptsAndParamsPage.OptionBox;
import jalview.gui.OptsAndParamsPage.ParamBox;
+import jalview.util.MessageManager;
import jalview.ws.jws2.JabaParamStore;
import jalview.ws.jws2.JabaPreset;
import jalview.ws.jws2.Jws2Discoverer;
GridBagLayout gbl = new GridBagLayout();
SetNamePanel.setLayout(gbl);
- JLabel setNameLabel = new JLabel("Current parameter set name :");
+ JLabel setNameLabel = new JLabel(MessageManager.getString("label.current_parameter_set_name"));
setNameLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 10));
setNameInfo.add(setNameLabel);
import jalview.bin.Cache;
import jalview.jbgui.GWsPreferences;
+import jalview.util.MessageManager;
import jalview.ws.jws2.Jws2Discoverer;
import jalview.ws.rest.RestServiceDescription;
JTextField urltf = new JTextField(url, 40);
JPanel panel = new JPanel(new BorderLayout());
JPanel pane12 = new JPanel(new BorderLayout());
- pane12.add(new JLabel("URL: "), BorderLayout.CENTER);
+ pane12.add(new JLabel(MessageManager.getString("label.url")), BorderLayout.CENTER);
pane12.add(urltf, BorderLayout.EAST);
panel.add(pane12, BorderLayout.NORTH);
boolean valid = false;
package jalview.jbgui;
import jalview.gui.JvSwingUtils;
+import jalview.util.MessageManager;
import java.awt.BorderLayout;
import java.awt.event.ActionEvent;
name = new JTextArea(1, 12);
JvSwingUtils.mgAddtoLayout(cpanel,
- "Short descriptive name for service", new JLabel("Name:"),
+ "Short descriptive name for service", new JLabel(MessageManager.getString("label.name")),
name, "wrap");
action = new JComboBox();
JvSwingUtils
.mgAddtoLayout(
cpanel,
"What kind of function the service performs (e.g. alignment, analysis, search, etc).",
- new JLabel("Service Action:"), action, "wrap");
+ new JLabel(MessageManager.getString("label.service_action")), action, "wrap");
descr = new JTextArea(4, 60);
descrVp = new JScrollPane();
descrVp.setViewportView(descr);
.mgAddtoLayout(
cpanel,
"URL to post data to service. Include any special parameters needed here",
- new JLabel("POST URL:"), urlVp, "wrap");
+ new JLabel(MessageManager.getString("label.post_url")), urlVp, "wrap");
urlsuff = new JTextArea();
urlsuff.setColumns(60);
.mgAddtoLayout(
cpanel,
"Optional suffix added to URL when retrieving results from service",
- new JLabel("URL Suffix:"), urlsuff, "wrap");
+ new JLabel(MessageManager.getString("label.url_suffix")), urlsuff, "wrap");
// input options
// details.add(cpanel = new JPanel(), BorderLayout.CENTER);
// cpanel.setLayout(new FlowLayout());
- hSeparable = new JCheckBox("per Sequence");
+ hSeparable = new JCheckBox(MessageManager.getString("label.per_seq"));
hSeparable
.setToolTipText("<html>"
+ JvSwingUtils
}
});
- vSeparable = new JCheckBox("Results are vertically separable");
+ vSeparable = new JCheckBox(MessageManager.getString("label.result_vertically_separable"));
vSeparable
.setToolTipText("<html>"
+ JvSwingUtils
--- /dev/null
+package jalview.util;
+
+import java.text.MessageFormat;
+import java.util.Locale;
+import java.util.ResourceBundle;
+import java.util.logging.Logger;
+
+/**
+ *
+ * @author David Roldan Martinez
+ * @author Thomas Abeel
+ *
+ *
+ */
+public class MessageManager {
+
+ private static ResourceBundle rb;
+
+ private static Logger log=Logger.getLogger(MessageManager.class.getCanonicalName());
+
+ private static Locale loc = Locale.getDefault();
+
+
+
+ static{
+ /* Localize Java dialogs */
+ Locale.setDefault(loc);
+ /* Getting messages for GV */
+ log.info("Getting messages for lang: "+loc);
+ rb = ResourceBundle.getBundle("lang.Messages", loc);
+ log.finest("Language keys: "+rb.keySet());
+
+ }
+
+ public static String getString(String key){
+ String value = "[missing key] " + key;
+ try{
+ value = rb.getString(key);
+ }catch(Exception e){
+ log.warning("I18N missing: "+loc+"\t"+key);
+ }
+ return value;
+ }
+
+ public static Locale getLocale() {
+ return loc;
+ }
+ public static String formatMessage(String key, Object[] params){
+ return MessageFormat.format(rb.getString(key), params);
+ }
+}
git://source.jalview.org / jalview.git / commitdiff