<tr>
<td width="60" align="center" nowrap><strong><a
id="Jalview.2.11.1">2.11.1</a><a id="Jalview.2.11.1.3">.3</a><br />
- <em>27/10/2020</em></strong></td>
+ <em>29/10/2020</em></strong></td>
<td align="left" valign="top">
<ul>
-
+
</ul>
</td>
<td align="left" valign="top">
<ul>
<li>
<!-- JAL-3765 -->Find doesn't always highlight all matching
- positions in a sequence
+ positions in a sequence (bug introduced in 2.11.1.2)
+ </li>
+ <li>
+ <!-- JAL-3760 -->Alignments containing one or more protein
+ sequences can be classed as nucleotide
+ </li>
+ <li>
+ <!-- JAL-3748 -->CDS alignment doesn't match original CDS
+ sequences after alignment of protein products (known defect
+ first reported for 2.11.1.0)
+ </li>
+ <li>
+ <!-- JAL-3725 -->No tooltip or popup menu for genomic features
+ outwith CDS shown overlaid on protein
+ </li>
+ <li>
+ <!-- JAL-3751 -->Overlapping CDS in ENA accessions are not
+ correctly mapped by Jalview (e.g. affects viral CDS with
+ ribosomal slippage, since 2.9.0)
+ </li>
+ <li>
+ <!-- JAL-3763 -->Spliced transcript CDS sequences don't show
+ CDS features
+ </li>
+ <li>
+ <!-- JAL-3700 -->Selections in CDS sequence panel don't
+ always select corresponding protein sequences
</li>
+ </ul> <em>Installer</em>
+ <ul>
<li>
<!-- JAL-3611 -->Space character in Jalview install path on
Windows prevents install4j launching getdown
</li>
+ </ul> <em>Development</em>
+ <ul>
+ <li>
+ <!-- JAL-3248 -->Fixed typos and specified compatible gradle
+ version numbers in doc/building.md
+ </li>
</ul>
</td>
</tr>
<!-- JAL-3127 -->Sequence ID colourscheme not re-applied
when alignment view restored from project (since Jalview 2.11.0)
</li>
+ <li>
+ <!-- JAL-3749 -->Duplicate CDS sequences are generated when
+ protein products for certain ENA records are repeatedly
+ shown via Calculate->Show Cross Refs
+ </li>
</ul>
</td>
</tr>