import compbio.metadata.ChunkHolder;\r
import compbio.metadata.JobSubmissionException;\r
import compbio.metadata.LimitExceededException;\r
+import compbio.metadata.Option;\r
+import compbio.metadata.Preset;\r
import compbio.metadata.UnsupportedRuntimeException;\r
+import compbio.metadata.WrongParameterException;\r
import compbio.runner.conservation.AACon;\r
\r
@WebService(endpointInterface = "compbio.data.msa.SequenceAnnotation", targetNamespace = JABAService.V2_SERVICE_NAMESPACE, serviceName = "AAConWS")\r
}\r
\r
@Override\r
+ public String customAnalize(List<FastaSequence> sequences,\r
+ List<Option<AACon>> options) throws UnsupportedRuntimeException,\r
+ LimitExceededException, JobSubmissionException,\r
+ WrongParameterException {\r
+ WSUtil.validateAAConInput(sequences);\r
+ return super.customAnalize(sequences, options);\r
+ }\r
+\r
+ @Override\r
+ public String presetAnalize(List<FastaSequence> sequences,\r
+ Preset<AACon> preset) throws UnsupportedRuntimeException,\r
+ LimitExceededException, JobSubmissionException,\r
+ WrongParameterException {\r
+ WSUtil.validateAAConInput(sequences);\r
+ return super.presetAnalize(sequences, preset);\r
+ }\r
+\r
+ @Override\r
public ChunkHolder pullExecStatistics(String jobId, long position) {\r
WSUtil.validateJobId(jobId);\r
String file = Configurator.getWorkDirectory(jobId) + File.separator\r