# You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
# The Jalview Authors are detailed in the 'AUTHORS' file.
###############################################################################
-# THE CASTOR PROPERTIES FILE\r
-# This file specifies values for Castor run-time which may be configured\r
-# by the user.\r
-# $Id$\r
-\r
-# This section defines Backwards compatibility switches.\r
-#\r
-# Hashtable/Map default mapping.\r
-# For backward compatibility with 0.9.5.2 and earlier.\r
-#\r
-#org.exolab.castor.xml.saveMapKeys=false\r
-\r
-# Defines the default XML parser to be used by Castor.\r
-# The parser must implement org.xml.sax.Parser.\r
-#\r
-org.exolab.castor.parser=org.apache.xerces.parsers.SAXParser\r
-\r
-# Defines the (default) XML serializer factory to use by Castor, which must\r
-# implement org.exolab.castor.xml.SerializerFactory; default is \r
-# org.exolab.castor.xml.XercesXMLSerializerFactory\r
-# \r
-# When using Castor XML with JDK 5.0, you may switch to the XercesJDK5XMLSerializerFactory\r
-# which will use the Xerces instance as shipped with the JDK itself; this avoids\r
-# having to download another Xerces instance and installing it. \r
-org.exolab.castor.xml.serializer.factory=org.exolab.castor.xml.XercesXMLSerializerFactory\r
-#org.exolab.castor.xml.serializer.factory=org.exolab.castor.xml.XercesJDK5XMLSerializerFactory\r
-\r
-# Defines the NodeType for use with Java primitive types (int, long, boolean,\r
-# etc). This value is only used by the Introspector. Valid values are either\r
-# "attribute" or "element". By default, all primitives are marshaled as\r
-# attributes. Uncomment the following line to change the NodeType to element.\r
-#\r
-#org.exolab.castor.xml.introspector.primitive.nodetype=element\r
-\r
-# Defines the Naming "style" or conventions to use when creating XML names\r
-# from Java class or field names.\r
-# Valid values are as follows:\r
-# -----------------------------------------------------------------\r
-# lower (default) | All names are lowercase with hyphens\r
-# | separating words.\r
-# |\r
-# | Example: personInfo = person-info\r
-# -----------------------------------------------------------------\r
-# mixed | All names are mixed case, with Uppercase\r
-# | character as the first letter of a new word.\r
-# |\r
-# | Example: personInfo = personInfo\r
-# | Example: FooBar = fooBar\r
-# -----------------------------------------------------------------\r
-# {Any ClassName} | Any Class which implements\r
-# | org.exolab.castor.xml.XMLNaming\r
-# -----------------------------------------------------------------\r
-#\r
-# By default, all names are treated as the "lower" option. To preserve the\r
-# Java mixed-case conventions, uncomment the following line.\r
-#\r
-#org.exolab.castor.xml.naming=mixed\r
-\r
-###############################\r
-# REGULAR EXPRESSION EVALUATORS\r
-#\r
-# Defines the Regular Expression Evaluator to be used by Castor.\r
-# The evaluator must implement org.exolab.castor.util.RegExpEvaluator.\r
-#\r
-# Uncomment the following to basically suppress Regular expressions evaluation:\r
-#org.exolab.castor.regexp=org.exolab.castor.xml.util.AlwaysTrueRegExpEvaluator\r
-#\r
-# An implementation which uses the Jakarta RegExp library:\r
-#org.exolab.castor.regexp=org.exolab.castor.util.JakartaRegExpEvaluator\r
-#\r
-# An implementation which uses the Jakarta ORO library:\r
-org.exolab.castor.regexp=org.exolab.castor.util.JakartaOroEvaluator\r
-\r
-# True if all documents should be indented on output by default.\r
-# Defaults to false.\r
-#\r
-#org.exolab.castor.indent=true\r
-\r
-# True if xml documents should be validated by the SAX Parser\r
-# Defaults to false.\r
-#\r
-org.exolab.castor.parser.validation=false\r
-\r
-# True for parser to support Namespaces.\r
-# Defaults to false.\r
-#\r
-org.exolab.castor.parser.namespaces=false\r
-\r
-# True if all documents should be validated by the marshaling framework\r
-# Defaults to true.\r
-#\r
-org.exolab.castor.marshalling.validation=true\r
-\r
-# Comma separated list of SAX 2 features that should be enabled for the\r
-# default parser.\r
-#\r
-#org.exolab.castor.sax.features=\r
-\r
-# Comma separated list of SAX 2 features that should be disabled for the\r
-# default parser.\r
-#\r
-#org.exolab.castor.sax.features-to-disable\r
-\r
-# True if debugging output should be generated.\r
-# Defaults to false.\r
-#\r
-org.exolab.castor.debug=false\r
-\r
-# List of collection handlers for Java 1.1 and Java 1.2 run-times:\r
-#\r
-org.exolab.castor.mapping.collections=\\r
- org.exolab.castor.mapping.loader.J1CollectionHandlers,\\r
- org.exolab.castor.mapping.loader.J2CollectionHandlers\r
-\r
-# List of persistence factories for the supported database servers:\r
-#\r
-org.exolab.castor.jdo.engines=\\r
- org.exolab.castor.jdo.drivers.OracleFactory,\\r
- org.exolab.castor.jdo.drivers.PostgreSQLFactory,\\r
- org.exolab.castor.jdo.drivers.SybaseFactory,\\r
- org.exolab.castor.jdo.drivers.SQLServerFactory,\\r
- org.exolab.castor.jdo.drivers.DB2Factory,\\r
- org.exolab.castor.jdo.drivers.InformixFactory,\\r
- org.exolab.castor.jdo.drivers.HsqlFactory,\\r
- org.exolab.castor.jdo.drivers.InstantDBFactory,\\r
- org.exolab.castor.jdo.drivers.InterbaseFactory,\\r
- org.exolab.castor.jdo.drivers.MySQLFactory,\\r
- org.exolab.castor.jdo.drivers.SapDbFactory,\\r
- org.exolab.castor.jdo.drivers.GenericFactory,\\r
- org.exolab.castor.jdo.drivers.DerbyFactory,\\r
- org.castor.jdo.drivers.PointbaseFactory,\\r
- org.castor.jdo.drivers.ProgressFactory\r
-\r
-# List of key generator factories:\r
-#\r
-org.exolab.castor.jdo.keyGeneratorFactories=\\r
- org.exolab.castor.jdo.keygen.MaxKeyGeneratorFactory,\\r
- org.exolab.castor.jdo.keygen.HighLowKeyGeneratorFactory,\\r
- org.exolab.castor.jdo.keygen.IdentityKeyGeneratorFactory,\\r
- org.exolab.castor.jdo.keygen.SequenceKeyGeneratorFactory,\\r
- org.exolab.castor.jdo.keygen.UUIDKeyGeneratorFactory\r
-\r
-# Collection handlers for the source code generator:\r
-#\r
-org.exolab.castor.builder.type.j2=\\r
- org.exolab.castor.builder.FieldInfoFactoryJ2\r
-org.exolab.castor.builder.type.j1=\\r
- org.exolab.castor.builder.FieldInfoFactory\r
-org.exolab.castor.builder.type.odmg=\\r
- org.exolab.castor.builder.FieldInfoFactoryODMG30\r
-\r
-# Configures the default time zone to apply to dates/times fetched from\r
-# database fields (if not already part of the data). Specify same format as\r
-# in java.util.TimeZone.getTimeZone, or the empty string to use the computer's\r
-# local time zone. Please see http://de.wikipedia.org/wiki/Zeitzone for\r
-# detailed information about time zones.\r
-#\r
-org.exolab.castor.jdo.defaultTimeZone=\r
-#org.exolab.castor.jdo.defaultTimeZone=GMT-8:00\r
-\r
-# List of TxSynchronizeable implementations:\r
-#\r
-#org.exolab.castor.persist.TxSynchronizable=\r
-\r
-# Sets the buffer size in bytes for fetching LOBs (this is dependent upon\r
-# the JDBC driver implementation). The value below == 5k.\r
-#\r
-org.exolab.castor.jdo.lobBufferSize=5120\r
-\r
-# True if database configuration should be initalization\r
-# when loading it (default: true).\r
-#\r
-#org.exolab.castor.jdo.DatabaseInitializeAtLoad=true\r
-\r
-# True if proxy classes should be used for JDBC connections and\r
-# prepared statements.\r
-# Defaults to true.\r
-#\r
-org.exolab.castor.persist.useProxies=false\r
-\r
-# MappingLoader implementations:\r
-#\r
-org.castor.mapping.loaderFactories=\\r
- org.castor.mapping.JDOMappingLoaderFactory,\\r
- org.castor.mapping.XMLMappingLoaderFactory\r
-\r
-# Cache implementations:\r
-#\r
-org.castor.cache.Factories=\\r
- org.castor.cache.simple.NoCacheFactory,\\r
- org.castor.cache.simple.TimeLimitedFactory,\\r
- org.castor.cache.simple.CountLimitedFactory,\\r
- org.castor.cache.simple.UnlimitedFactory,\\r
- org.castor.cache.distributed.FKCacheFactory,\\r
- org.castor.cache.distributed.JcsCacheFactory,\\r
- org.castor.cache.distributed.JCacheFactory,\\r
- org.castor.cache.distributed.CoherenceCacheFactory,\\r
- org.castor.cache.distributed.OsCacheFactory,\\r
- org.castor.cache.hashbelt.FIFOHashbeltFactory,\\r
- org.castor.cache.hashbelt.LRUHashbeltFactory,\\r
- org.castor.cache.distributed.EHCacheFactory,\\r
- org.castor.cache.distributed.GigaspacesCacheFactory\r
-\r
-# TransactionManagerFactory implementations:\r
-#\r
-org.castor.transactionmanager.Factories=\\r
- org.castor.transactionmanager.WebSphereTransactionManagerFactory,\\r
- org.castor.transactionmanager.WebSphere5TransactionManagerFactory,\\r
- org.castor.transactionmanager.WebSphere51TransactionManagerFactory,\\r
- org.castor.transactionmanager.LocalTransactionManagerFactory,\\r
- org.castor.transactionmanager.JNDIENCTransactionManagerFactory,\\r
- org.castor.transactionmanager.JOTMTransactionManagerFactory\r
-\r
-# Selects whether the TransactionManager should be initialized at registration,\r
-# or lazily when requested for the first time.\r
-# Defaults to false.\r
-#\r
-org.castor.transactionmanager.InitializeAtRegistration=false\r
-\r
-# Instructs Castor JDO to use the JDBC 3.0-specific features to obtain\r
-# the generated value of an identity column.\r
-# Defaults to false.\r
-#\r
-org.castor.jdo.use.jdbc30=false\r
-\r
-# Specifies whether to use ANSI-compliant SQL for MS SQL Server.\r
-# Defaults to false.\r
-#\r
-org.exolab.castor.jdo.sqlserver.ansi-compliant=false\r
-\r
-# Specifyies whether the ClassDescriptorResolver should (automatically) search\r
-# for and consult with package mapping files (.castor.xml) to retrieve class\r
-# descriptor information; on by default.\r
-# Defaults to true.\r
-#\r
-#org.exolab.castor.xml.loadPackageMappings=false\r
+# THE CASTOR PROPERTIES FILE
+# This file specifies values for Castor run-time which may be configured
+# by the user.
+# $Id$
+
+# This section defines Backwards compatibility switches.
+#
+# Hashtable/Map default mapping.
+# For backward compatibility with 0.9.5.2 and earlier.
+#
+#org.exolab.castor.xml.saveMapKeys=false
+
+# Defines the default XML parser to be used by Castor.
+# The parser must implement org.xml.sax.Parser.
+#
+org.exolab.castor.parser=org.apache.xerces.parsers.SAXParser
+
+# Defines the (default) XML serializer factory to use by Castor, which must
+# implement org.exolab.castor.xml.SerializerFactory; default is
+# org.exolab.castor.xml.XercesXMLSerializerFactory
+#
+# When using Castor XML with JDK 5.0, you may switch to the XercesJDK5XMLSerializerFactory
+# which will use the Xerces instance as shipped with the JDK itself; this avoids
+# having to download another Xerces instance and installing it.
+org.exolab.castor.xml.serializer.factory=org.exolab.castor.xml.XercesXMLSerializerFactory
+#org.exolab.castor.xml.serializer.factory=org.exolab.castor.xml.XercesJDK5XMLSerializerFactory
+
+# Defines the NodeType for use with Java primitive types (int, long, boolean,
+# etc). This value is only used by the Introspector. Valid values are either
+# "attribute" or "element". By default, all primitives are marshaled as
+# attributes. Uncomment the following line to change the NodeType to element.
+#
+#org.exolab.castor.xml.introspector.primitive.nodetype=element
+
+# Defines the Naming "style" or conventions to use when creating XML names
+# from Java class or field names.
+# Valid values are as follows:
+# -----------------------------------------------------------------
+# lower (default) | All names are lowercase with hyphens
+# | separating words.
+# |
+# | Example: personInfo = person-info
+# -----------------------------------------------------------------
+# mixed | All names are mixed case, with Uppercase
+# | character as the first letter of a new word.
+# |
+# | Example: personInfo = personInfo
+# | Example: FooBar = fooBar
+# -----------------------------------------------------------------
+# {Any ClassName} | Any Class which implements
+# | org.exolab.castor.xml.XMLNaming
+# -----------------------------------------------------------------
+#
+# By default, all names are treated as the "lower" option. To preserve the
+# Java mixed-case conventions, uncomment the following line.
+#
+#org.exolab.castor.xml.naming=mixed
+
+###############################
+# REGULAR EXPRESSION EVALUATORS
+#
+# Defines the Regular Expression Evaluator to be used by Castor.
+# The evaluator must implement org.exolab.castor.util.RegExpEvaluator.
+#
+# Uncomment the following to basically suppress Regular expressions evaluation:
+#org.exolab.castor.regexp=org.exolab.castor.xml.util.AlwaysTrueRegExpEvaluator
+#
+# An implementation which uses the Jakarta RegExp library:
+#org.exolab.castor.regexp=org.exolab.castor.util.JakartaRegExpEvaluator
+#
+# An implementation which uses the Jakarta ORO library:
+org.exolab.castor.regexp=org.exolab.castor.util.JakartaOroEvaluator
+
+# True if all documents should be indented on output by default.
+# Defaults to false.
+#
+#org.exolab.castor.indent=true
+
+# True if xml documents should be validated by the SAX Parser
+# Defaults to false.
+#
+org.exolab.castor.parser.validation=false
+
+# True for parser to support Namespaces.
+# Defaults to false.
+#
+org.exolab.castor.parser.namespaces=false
+
+# True if all documents should be validated by the marshaling framework
+# Defaults to true.
+#
+org.exolab.castor.marshalling.validation=true
+
+# Comma separated list of SAX 2 features that should be enabled for the
+# default parser.
+#
+#org.exolab.castor.sax.features=
+
+# Comma separated list of SAX 2 features that should be disabled for the
+# default parser.
+#
+#org.exolab.castor.sax.features-to-disable
+
+# True if debugging output should be generated.
+# Defaults to false.
+#
+org.exolab.castor.debug=false
+
+# List of collection handlers for Java 1.1 and Java 1.2 run-times:
+#
+org.exolab.castor.mapping.collections=\
+ org.exolab.castor.mapping.loader.J1CollectionHandlers,\
+ org.exolab.castor.mapping.loader.J2CollectionHandlers
+
+# List of persistence factories for the supported database servers:
+#
+org.exolab.castor.jdo.engines=\
+ org.exolab.castor.jdo.drivers.OracleFactory,\
+ org.exolab.castor.jdo.drivers.PostgreSQLFactory,\
+ org.exolab.castor.jdo.drivers.SybaseFactory,\
+ org.exolab.castor.jdo.drivers.SQLServerFactory,\
+ org.exolab.castor.jdo.drivers.DB2Factory,\
+ org.exolab.castor.jdo.drivers.InformixFactory,\
+ org.exolab.castor.jdo.drivers.HsqlFactory,\
+ org.exolab.castor.jdo.drivers.InstantDBFactory,\
+ org.exolab.castor.jdo.drivers.InterbaseFactory,\
+ org.exolab.castor.jdo.drivers.MySQLFactory,\
+ org.exolab.castor.jdo.drivers.SapDbFactory,\
+ org.exolab.castor.jdo.drivers.GenericFactory,\
+ org.exolab.castor.jdo.drivers.DerbyFactory,\
+ org.castor.jdo.drivers.PointbaseFactory,\
+ org.castor.jdo.drivers.ProgressFactory
+
+# List of key generator factories:
+#
+org.exolab.castor.jdo.keyGeneratorFactories=\
+ org.exolab.castor.jdo.keygen.MaxKeyGeneratorFactory,\
+ org.exolab.castor.jdo.keygen.HighLowKeyGeneratorFactory,\
+ org.exolab.castor.jdo.keygen.IdentityKeyGeneratorFactory,\
+ org.exolab.castor.jdo.keygen.SequenceKeyGeneratorFactory,\
+ org.exolab.castor.jdo.keygen.UUIDKeyGeneratorFactory
+
+# Collection handlers for the source code generator:
+#
+org.exolab.castor.builder.type.j2=\
+ org.exolab.castor.builder.FieldInfoFactoryJ2
+org.exolab.castor.builder.type.j1=\
+ org.exolab.castor.builder.FieldInfoFactory
+org.exolab.castor.builder.type.odmg=\
+ org.exolab.castor.builder.FieldInfoFactoryODMG30
+
+# Configures the default time zone to apply to dates/times fetched from
+# database fields (if not already part of the data). Specify same format as
+# in java.util.TimeZone.getTimeZone, or the empty string to use the computer's
+# local time zone. Please see http://de.wikipedia.org/wiki/Zeitzone for
+# detailed information about time zones.
+#
+org.exolab.castor.jdo.defaultTimeZone=
+#org.exolab.castor.jdo.defaultTimeZone=GMT-8:00
+
+# List of TxSynchronizeable implementations:
+#
+#org.exolab.castor.persist.TxSynchronizable=
+
+# Sets the buffer size in bytes for fetching LOBs (this is dependent upon
+# the JDBC driver implementation). The value below == 5k.
+#
+org.exolab.castor.jdo.lobBufferSize=5120
+
+# True if database configuration should be initalization
+# when loading it (default: true).
+#
+#org.exolab.castor.jdo.DatabaseInitializeAtLoad=true
+
+# True if proxy classes should be used for JDBC connections and
+# prepared statements.
+# Defaults to true.
+#
+org.exolab.castor.persist.useProxies=false
+
+# MappingLoader implementations:
+#
+org.castor.mapping.loaderFactories=\
+ org.castor.mapping.JDOMappingLoaderFactory,\
+ org.castor.mapping.XMLMappingLoaderFactory
+
+# Cache implementations:
+#
+org.castor.cache.Factories=\
+ org.castor.cache.simple.NoCacheFactory,\
+ org.castor.cache.simple.TimeLimitedFactory,\
+ org.castor.cache.simple.CountLimitedFactory,\
+ org.castor.cache.simple.UnlimitedFactory,\
+ org.castor.cache.distributed.FKCacheFactory,\
+ org.castor.cache.distributed.JcsCacheFactory,\
+ org.castor.cache.distributed.JCacheFactory,\
+ org.castor.cache.distributed.CoherenceCacheFactory,\
+ org.castor.cache.distributed.OsCacheFactory,\
+ org.castor.cache.hashbelt.FIFOHashbeltFactory,\
+ org.castor.cache.hashbelt.LRUHashbeltFactory,\
+ org.castor.cache.distributed.EHCacheFactory,\
+ org.castor.cache.distributed.GigaspacesCacheFactory
+
+# TransactionManagerFactory implementations:
+#
+org.castor.transactionmanager.Factories=\
+ org.castor.transactionmanager.WebSphereTransactionManagerFactory,\
+ org.castor.transactionmanager.WebSphere5TransactionManagerFactory,\
+ org.castor.transactionmanager.WebSphere51TransactionManagerFactory,\
+ org.castor.transactionmanager.LocalTransactionManagerFactory,\
+ org.castor.transactionmanager.JNDIENCTransactionManagerFactory,\
+ org.castor.transactionmanager.JOTMTransactionManagerFactory
+
+# Selects whether the TransactionManager should be initialized at registration,
+# or lazily when requested for the first time.
+# Defaults to false.
+#
+org.castor.transactionmanager.InitializeAtRegistration=false
+
+# Instructs Castor JDO to use the JDBC 3.0-specific features to obtain
+# the generated value of an identity column.
+# Defaults to false.
+#
+org.castor.jdo.use.jdbc30=false
+
+# Specifies whether to use ANSI-compliant SQL for MS SQL Server.
+# Defaults to false.
+#
+org.exolab.castor.jdo.sqlserver.ansi-compliant=false
+
+# Specifyies whether the ClassDescriptorResolver should (automatically) search
+# for and consult with package mapping files (.castor.xml) to retrieve class
+# descriptor information; on by default.
+# Defaults to true.
+#
+#org.exolab.castor.xml.loadPackageMappings=false
git://source.jalview.org / jalview.git / commitdiff