spellchecking

diff --git a/TheJalviewTutorial.tex b/TheJalviewTutorial.tex
index 52faea0..496d6fe 100644 (file)
--- a/TheJalviewTutorial.tex
+++ b/TheJalviewTutorial.tex
@@ -462,7 +462,7 @@ From the main menu select {\sl File $\Rightarrow$ Save Project} and a file save
 
 \exercise{Saving Alignments}{
 \label{save}
-\exstep{Start Jalview, close all windows and load the ferrodoxin alignment from pFam (accession number PF03460 (see Exercise \ref{load}).
+\exstep{Start Jalview, close all windows and load the ferredoxin alignment from pFam (accession number PF03460 (see Exercise \ref{load}).
 }
 \exstep{
 Select {\sl File $\Rightarrow$ Save As} from the alignment window menu. Choose a location into which to save the alignment and select a format. All formats except {\sl  Jalview } can be viewed in a normal text editor (e.g. Notepad) or in a web browser. Enter a file name and click {\sl Save}. Check this file by browsing to it with your web browser or by closing all windows and opening it with Jalview. 
@@ -566,8 +566,8 @@ The current selection can be copied to the system clipboard (in PFAM format). It
 
 \exercise{Making selections and groups}{
 \label{exselect}
-\exstep{Close all windows in  Jalview and load the ferrodoxin alignment (PFAM ID PF03460). Choose a residue and  place the mouse cursor on it. Click and drag the mouse cursor to create a selection. As you drag, a red box will `rubber band' out to show the extent of the selection. Release the mouse button and a red box should border the selected region. Now press [ESC] to clear the selection.}
-\exstep{
+\exstep{Close all windows in  Jalview and load the ferredoxin alignment (PFAM
+ID PF03460). Choose a residue and  place the mouse cursor on it. Click and drag the mouse cursor to create a selection. As you drag, a red box will `rubber band' out to show the extent of the selection. Release the mouse button and a red box should border the selected region. Now press [ESC] to clear the selection.} \exstep{
 Select one sequence by clicking on the id panel. Note that the sequence ID takes on a highlighted background and a red box appears around the selected sequence. Now hold down [SHIFT] and click another sequence ID a few positions above or below. Note how the selection expands to include all the sequences between the two positions on which you clicked.
 Now hold down [CTRL] and click on several sequences ID's both selected and unselected. Note how unselected IDs are individually added to the selection and previously selected IDs are individually deselected. 
 }
@@ -714,7 +714,7 @@ group is dragged to the right with [CTRL] pressed.}
 \label{mousealedit}
 \exstep{ Load the URL
 \textsf{http://www.jalview.org/tutorial/unaligned.fa} which contains part of the
-ferrodoxin alignment from PF03460.
+ferredoxin alignment from PF03460.
 
  You are going to manually reconstruct the alignment that jalview loads by
  default. Remember to use [CTRL]+Z to undo an edit, or the {\tr File $\LeftArrow$
@@ -740,7 +740,7 @@ sequences at column 38 by holding [CTRL] and clicking on the R in FER1\_SPIOL an
 dragging one column to right. Insert another gap at column 47 in all sequences in
 the same way.}
 
-\exstep{ Correct the feredoxin domain alignment for FER1\_SPIOL by
+\exstep{ Correct the ferredoxin domain alignment for FER1\_SPIOL by
 insert two additional gaps after the gap at column 47: hold [SHIFT] and click and
 drag on the G and move it two columns to the right.}
 

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