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Remove difinition of UNIREF for JABAWS from jpred.pl
author
Sasha Sherstnev
<a.sherstnev@dundee.ac.uk>
Mon, 14 Oct 2013 09:56:14 +0000
(10:56 +0100)
committer
Sasha Sherstnev
<a.sherstnev@dundee.ac.uk>
Mon, 14 Oct 2013 09:56:14 +0000
(10:56 +0100)
binaries/src/jpred/jpred.pl
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diff --git
a/binaries/src/jpred/jpred.pl
b/binaries/src/jpred/jpred.pl
index
436ae63
..
99d7fdc
100755
(executable)
--- a/
binaries/src/jpred/jpred.pl
+++ b/
binaries/src/jpred/jpred.pl
@@
-68,7
+68,7
@@
The option untoggles this step and stops jpred at the concise file generation
=item -jabaws
-Redefined basic variable in order to use the script within JABAWS
+Redefines some basic variables in order to use the script within JABAWS
=item -verbose
@@
-226,11
+226,6
@@
$goal = "seq" if ( defined $seqgoal );
#####################################################################################################
# Key to database information and information for accessing them
-if ( defined $jabaws ) {
- $db_path = "/homes/www-jpred/databases";
- $db_entry = "cluster";
-}
-
my $database = {
## default database used by Jpred