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Replace Progs/RNAalifold with x64 binary and add all other programs
author
Sasha Sherstnev
<a.sherstnev@dundee.ac.uk>
Thu, 5 Sep 2013 10:57:22 +0000
(11:57 +0100)
committer
Sasha Sherstnev
<a.sherstnev@dundee.ac.uk>
Thu, 5 Sep 2013 10:57:22 +0000
(11:57 +0100)
25 files changed:
binaries/src/ViennaRNA/Progs/RNA2Dfold
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNALalifold
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNALfold
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAPKplex
[new file with mode: 0755]
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blob
binaries/src/ViennaRNA/Progs/RNAaliduplex
[new file with mode: 0755]
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blob
binaries/src/ViennaRNA/Progs/RNAalifold
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history
binaries/src/ViennaRNA/Progs/RNAcofold
[new file with mode: 0755]
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blob
binaries/src/ViennaRNA/Progs/RNAdistance
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAduplex
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAeval
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAfold
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAheat
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAinverse
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNApaln
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAparconv
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNApdist
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAplex
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAplfold
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAplot
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAsnoop
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAsubopt
[new file with mode: 0755]
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binaries/src/ViennaRNA/Progs/RNAup
[new file with mode: 0755]
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binaries/src/ViennaRNA/RNAforester/src/RNAforester
[new file with mode: 0755]
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binaries/src/ViennaRNA/Utils/b2ct
[new file with mode: 0755]
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binaries/src/ViennaRNA/Utils/popt
[new file with mode: 0755]
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diff --git a/binaries/src/ViennaRNA/Progs/RNA2Dfold
b/binaries/src/ViennaRNA/Progs/RNA2Dfold
new file mode 100755
(executable)
index 0000000..
626292e
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNA2Dfold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNALalifold
b/binaries/src/ViennaRNA/Progs/RNALalifold
new file mode 100755
(executable)
index 0000000..
1ef6755
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNALalifold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNALfold
b/binaries/src/ViennaRNA/Progs/RNALfold
new file mode 100755
(executable)
index 0000000..
e8f13bb
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNALfold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAPKplex
b/binaries/src/ViennaRNA/Progs/RNAPKplex
new file mode 100755
(executable)
index 0000000..
2d21d87
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAPKplex differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAaliduplex
b/binaries/src/ViennaRNA/Progs/RNAaliduplex
new file mode 100755
(executable)
index 0000000..
17788a8
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAaliduplex differ
diff --git
a/binaries/src/ViennaRNA/Progs/RNAalifold
b/binaries/src/ViennaRNA/Progs/RNAalifold
index
4def1af
..
42d7fcf
100755
(executable)
Binary files a/binaries/src/ViennaRNA/Progs/RNAalifold and b/binaries/src/ViennaRNA/Progs/RNAalifold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAcofold
b/binaries/src/ViennaRNA/Progs/RNAcofold
new file mode 100755
(executable)
index 0000000..
e3221cb
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAcofold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAdistance
b/binaries/src/ViennaRNA/Progs/RNAdistance
new file mode 100755
(executable)
index 0000000..
0cfa379
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAdistance differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAduplex
b/binaries/src/ViennaRNA/Progs/RNAduplex
new file mode 100755
(executable)
index 0000000..
7714de6
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAduplex differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAeval
b/binaries/src/ViennaRNA/Progs/RNAeval
new file mode 100755
(executable)
index 0000000..
88183d5
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAeval differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAfold
b/binaries/src/ViennaRNA/Progs/RNAfold
new file mode 100755
(executable)
index 0000000..
48cd281
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAfold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAheat
b/binaries/src/ViennaRNA/Progs/RNAheat
new file mode 100755
(executable)
index 0000000..
782b369
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAheat differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAinverse
b/binaries/src/ViennaRNA/Progs/RNAinverse
new file mode 100755
(executable)
index 0000000..
7ad9066
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAinverse differ
diff --git a/binaries/src/ViennaRNA/Progs/RNApaln
b/binaries/src/ViennaRNA/Progs/RNApaln
new file mode 100755
(executable)
index 0000000..
0e37a0c
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNApaln differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAparconv
b/binaries/src/ViennaRNA/Progs/RNAparconv
new file mode 100755
(executable)
index 0000000..
5d8d707
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAparconv differ
diff --git a/binaries/src/ViennaRNA/Progs/RNApdist
b/binaries/src/ViennaRNA/Progs/RNApdist
new file mode 100755
(executable)
index 0000000..
6e6bc4a
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNApdist differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAplex
b/binaries/src/ViennaRNA/Progs/RNAplex
new file mode 100755
(executable)
index 0000000..
3a4d9ca
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAplex differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAplfold
b/binaries/src/ViennaRNA/Progs/RNAplfold
new file mode 100755
(executable)
index 0000000..
e80f801
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAplfold differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAplot
b/binaries/src/ViennaRNA/Progs/RNAplot
new file mode 100755
(executable)
index 0000000..
266eb6b
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAplot differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAsnoop
b/binaries/src/ViennaRNA/Progs/RNAsnoop
new file mode 100755
(executable)
index 0000000..
3582fb1
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAsnoop differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAsubopt
b/binaries/src/ViennaRNA/Progs/RNAsubopt
new file mode 100755
(executable)
index 0000000..
fabeb22
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAsubopt differ
diff --git a/binaries/src/ViennaRNA/Progs/RNAup
b/binaries/src/ViennaRNA/Progs/RNAup
new file mode 100755
(executable)
index 0000000..
1ada9e8
Binary files /dev/null and b/binaries/src/ViennaRNA/Progs/RNAup differ
diff --git a/binaries/src/ViennaRNA/RNAforester/src/RNAforester
b/binaries/src/ViennaRNA/RNAforester/src/RNAforester
new file mode 100755
(executable)
index 0000000..
a0b5907
Binary files /dev/null and b/binaries/src/ViennaRNA/RNAforester/src/RNAforester differ
diff --git a/binaries/src/ViennaRNA/Utils/b2ct
b/binaries/src/ViennaRNA/Utils/b2ct
new file mode 100755
(executable)
index 0000000..
84054ad
Binary files /dev/null and b/binaries/src/ViennaRNA/Utils/b2ct differ
diff --git a/binaries/src/ViennaRNA/Utils/popt
b/binaries/src/ViennaRNA/Utils/popt
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index 0000000..
60b59d6
Binary files /dev/null and b/binaries/src/ViennaRNA/Utils/popt differ