From: cmzmasek@gmail.com Date: Wed, 4 Dec 2013 21:40:57 +0000 (+0000) Subject: inprogress X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;ds=sidebyside;h=56e0222aa798aed2a460ecda79d5c48104668c9c;p=jalview.git inprogress --- diff --git a/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb b/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb index 90c50dc..e07a620 100644 --- a/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb +++ b/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb @@ -135,7 +135,7 @@ module Evoruby dsx_output = "#{hmm_name}/#{hmm_name}__#{hmm_name}__ee#{e_value_exp.to_s}_#{length}" - unless File.exist? d2f_output + unless File.exist? dsx_output puts "e. dsx:" cmd = "#{DSX} -d -e=1e-#{e_value_exp.to_s} -l=#{length} #{hmm_name} #{hmmscan_output} #{input} #{dsx_output}" run_command( cmd )