From: James Procter <j.procter@dundee.ac.uk>
Date: Sun, 1 Oct 2023 12:26:54 +0000 (+0100)
Subject: JAL-244 JAL-4091 FIXME for JAL-3362 patch testCalculateIdWidth_withMaxWidth test... 
X-Git-Tag: Release_2_11_3_0~6^2~9
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;ds=sidebyside;h=7050afe69de0bcfb55cdd28c913fd75357148cd0;p=jalview.git

JAL-244 JAL-4091 FIXME for JAL-3362 patch testCalculateIdWidth_withMaxWidth test for new annotation label marks
---

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index e2c91ba..cd9b70c 100644
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -302,7 +302,11 @@ public class AlignmentPanel extends GAlignmentPanel implements
 
   /**
    * Calculate the width of the alignment labels based on the displayed names
-   * and any bounds on label width set in preferences.
+   * and any bounds on label width set in preferences. Also includes annotations
+   * not actually visible.
+   * 
+   * FIXME JAL-244 JAL-4091 - doesn't include sequence associated annotation
+   * label decorators and only called during tests
    * 
    * @param maxwidth
    *          -1 or maximum width allowed for IdWidth
diff --git a/test/jalview/gui/AlignmentPanelTest.java b/test/jalview/gui/AlignmentPanelTest.java
index 86b22d5..37b8582 100644
--- a/test/jalview/gui/AlignmentPanelTest.java
+++ b/test/jalview/gui/AlignmentPanelTest.java
@@ -208,6 +208,7 @@ public class AlignmentPanelTest
   /**
    * Test the variant of calculateIdWidth that computes the longest of any
    * sequence name or annotation label width
+   * FIXME: test needs updating for JAL-244 and JAL-4091
    */
   @Test(groups = "Functional")
   public void testCalculateIdWidth_withMaxWidth()