From: cmzmasek Date: Thu, 2 Mar 2017 01:31:57 +0000 (-0800) Subject: removed forced display of found nodes X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=0459b05ab08fd24ab83f0fb80e37e5a6f85351f1;p=jalview.git removed forced display of found nodes --- diff --git a/forester/java/src/org/forester/archaeopteryx/AptxConstants.java b/forester/java/src/org/forester/archaeopteryx/AptxConstants.java index c884a0f..262bb1e 100644 --- a/forester/java/src/org/forester/archaeopteryx/AptxConstants.java +++ b/forester/java/src/org/forester/archaeopteryx/AptxConstants.java @@ -39,7 +39,7 @@ public final class AptxConstants { final static boolean __ALLOW_PHYLOGENETIC_INFERENCE = true; public final static String PRG_NAME = "Archaeopteryx"; final static String VERSION = "0.9921 beta"; - final static String PRG_DATE = "170214"; + final static String PRG_DATE = "170301"; final static String DEFAULT_CONFIGURATION_FILE_NAME = "_aptx_configuration_file"; final static String[] DEFAULT_FONT_CHOICES = { "Arial Unicode MS", "Dialog", "SansSerif", "Sans", "Arial", "Helvetica" }; diff --git a/forester/java/src/org/forester/archaeopteryx/TreePanel.java b/forester/java/src/org/forester/archaeopteryx/TreePanel.java index 18a8254..e0706da 100644 --- a/forester/java/src/org/forester/archaeopteryx/TreePanel.java +++ b/forester/java/src/org/forester/archaeopteryx/TreePanel.java @@ -5709,10 +5709,7 @@ public final class TreePanel extends JPanel implements ActionListener, MouseWhee } } final boolean disallow_shortcutting = ( dynamic_hiding_factor < 40 ) - || getControlPanel().isUseVisualStyles() || getOptions().isShowDefaultNodeShapesForMarkedNodes() - || ( ( getFoundNodes0() != null ) && !getFoundNodes0().isEmpty() ) - || ( ( getFoundNodes1() != null ) && !getFoundNodes1().isEmpty() ) - || ( ( getCurrentExternalNodes() != null ) && !getCurrentExternalNodes().isEmpty() ) + /* || getControlPanel().isUseVisualStyles() || getOptions().isShowDefaultNodeShapesForMarkedNodes()*/ //TODO check if this is really not needed. || to_graphics_file || to_pdf; for( final PhylogenyNode element : _nodes_in_preorder ) { paintNodeRectangular( g,