From: James Procter <j.procter@dundee.ac.uk>
Date: Wed, 1 Nov 2023 23:36:05 +0000 (+0000)
Subject: JAL-4090 JAL-4281 JAL-4311 release notes
X-Git-Tag: Release_2_11_4_0~116
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=051cab343aed415a342a787e10ebd075f05243f6;p=jalview.git

JAL-4090 JAL-4281 JAL-4311 release notes
---

diff --git a/help/markdown/releases/release-2_11_3_0.md b/help/markdown/releases/release-2_11_3_0.md
index 7a2c878..f7e7b88 100644
--- a/help/markdown/releases/release-2_11_3_0.md
+++ b/help/markdown/releases/release-2_11_3_0.md
@@ -33,6 +33,7 @@ channel: "release"
 - <!-- JAL-3858 --> Import and display alphafold alignment uncertainty matrices from JSON
 - <!-- JAL-4134,JAL-4158 --> Column-wise alignment groups and selections and interactive tree viewer for PAE matrices
 - <!-- JAL-4124 --> Store/Restore PAE data and visualisation settings from Jalview Project
+- <!-- JAL-4281 --> Store and restore adjustable ID margin and annotation panel height in Jalview projects
 - <!-- JAL-4083 --> Multiple residue sidechain highlighting in structure viewers from PAE mouseovers
 
 ### Jalview on the command line
@@ -81,6 +82,7 @@ channel: "release"
 - <!-- JAL-4075 --> Don't add string label version of DSSP secondary structure codes in secondary structure annotation rows
 - <!-- JAL-4182 --> reference annotation not correctly transferred to alignment containing a sub-sequence when a selection is active
 - <!-- JAL-4177 --> Can press 'Add' or 'New View' multiple times when manually adding and viewing a 3D structure via structure chooser
+- <!-- JAL-4311 --> 3D beacons sources providing models scored with PLDDT and pTM not sorted against alphaFoldDB models
 - <!-- JAL-4133 --> Jalview project does not preserve font aspect ratio when Viewport is zoomed with mouse
 - <!-- JAL-4253 --> Lower line of the sequence group border does not align with vertical and background residue box
 - <!-- JAL-4128 --> Resizing overview quickly with solid-drags enabled causes exception