From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Thu, 25 Apr 2019 09:11:47 +0000 (+0100)
Subject: JAL-3010 updated SO data file to latest 3.1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=0dcb37afdc100bda62225a34e3a45d26460db0e0;p=jalview.git

JAL-3010 updated SO data file to latest 3.1
https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so-simple.obo
---

diff --git a/resources/so-simple.obo.zip b/resources/so-simple.obo.zip
new file mode 100644
index 0000000..5f2c6d5
Binary files /dev/null and b/resources/so-simple.obo.zip differ
diff --git a/resources/so-xp-simple.obo.zip b/resources/so-xp-simple.obo.zip
deleted file mode 100644
index d150da0..0000000
Binary files a/resources/so-xp-simple.obo.zip and /dev/null differ
diff --git a/src/jalview/ext/so/SequenceOntology.java b/src/jalview/ext/so/SequenceOntology.java
index 16b1562..34e794e 100644
--- a/src/jalview/ext/so/SequenceOntology.java
+++ b/src/jalview/ext/so/SequenceOntology.java
@@ -93,7 +93,7 @@ public class SequenceOntology extends OntologyBase
     aliases = new HashMap<>();
     termIsA = new HashMap<>();
 
-    loadOntologyZipFile("so-xp-simple.obo");
+    loadOntologyZipFile("so-simple.obo");
   }
 
   /**