From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 16 Nov 2005 17:02:14 +0000 (+0000)
Subject: Highlight doesnt use offset
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=0ec05d5a2b604aaedcca284a696a4fc71707b444;p=jalview.git

Highlight doesnt use offset
---

diff --git a/src/MCview/AppletPDBCanvas.java b/src/MCview/AppletPDBCanvas.java
index 1df39fa..4c62b60 100755
--- a/src/MCview/AppletPDBCanvas.java
+++ b/src/MCview/AppletPDBCanvas.java
@@ -99,7 +99,7 @@ public class AppletPDBCanvas extends Panel implements MouseListener, MouseMotion
      highlightBond1 = null;
      highlightBond2 = null;
 
-     int index = ii - mainchain.seqstart - mainchain.offset+1;
+     int index = ii - mainchain.seqstart;
      if(index <0 )
        return;
 
diff --git a/src/MCview/PDBCanvas.java b/src/MCview/PDBCanvas.java
index f0806a8..33dfb8b 100755
--- a/src/MCview/PDBCanvas.java
+++ b/src/MCview/PDBCanvas.java
@@ -557,13 +557,13 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
 
             if(highlightBond1!=null && highlightBond1==tmpBond)
             {
-              g.setColor(tmpBond.endCol.brighter().brighter().brighter());
+              g.setColor(tmpBond.endCol.brighter().brighter().brighter().brighter());
               drawLine(g, xmid, ymid, xend, yend);
             }
 
             if(highlightBond2!=null && highlightBond2==tmpBond)
             {
-              g.setColor(tmpBond.startCol.brighter().brighter().brighter());
+              g.setColor(tmpBond.startCol.brighter().brighter().brighter().brighter());
               drawLine(g, xstart, ystart, xmid, ymid);
             }
 
@@ -846,7 +846,8 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
     highlightBond1 = null;
     highlightBond2 = null;
 
-    int index = ii - mainchain.seqstart - mainchain.offset+1;
+    int index = ii - mainchain.seqstart;
+
     if(index <0 )
       return;