From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 30 May 2016 14:43:06 +0000 (+0100)
Subject: JAL-1551 formatting
X-Git-Tag: Release_2_10_0~196^2~3^2~4
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=0ff10fddf3364f8a3c657355cfb4bc45ab5485a8;p=jalview.git

JAL-1551 formatting
---

diff --git a/src/jalview/appletgui/AnnotationLabels.java b/src/jalview/appletgui/AnnotationLabels.java
index 5727e9c..c963202 100755
--- a/src/jalview/appletgui/AnnotationLabels.java
+++ b/src/jalview/appletgui/AnnotationLabels.java
@@ -162,6 +162,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
     return row;
   }
 
+  @Override
   public void actionPerformed(ActionEvent evt)
   {
     AlignmentAnnotation[] aa = av.getAlignment().getAlignmentAnnotation();
@@ -261,6 +262,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
 
   boolean resizePanel = false;
 
+  @Override
   public void mouseMoved(MouseEvent evt)
   {
     resizePanel = evt.getY() < 10 && evt.getX() < 14;
@@ -306,6 +308,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
     dragCancelled = true;
   }
 
+  @Override
   public void mouseDragged(MouseEvent evt)
   {
     if (dragCancelled)
@@ -365,10 +368,12 @@ public class AnnotationLabels extends Panel implements ActionListener,
     }
   }
 
+  @Override
   public void mouseClicked(MouseEvent evt)
   {
   }
 
+  @Override
   public void mouseReleased(MouseEvent evt)
   {
     if (!resizePanel && !dragCancelled)
@@ -400,6 +405,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
     ap.annotationPanel.repaint();
   }
 
+  @Override
   public void mouseEntered(MouseEvent evt)
   {
     if (evt.getY() < 10 && evt.getX() < 14)
@@ -409,6 +415,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
     }
   }
 
+  @Override
   public void mouseExited(MouseEvent evt)
   {
     dragCancelled = false;
@@ -427,6 +434,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
     repaint();
   }
 
+  @Override
   public void mousePressed(MouseEvent evt)
   {
     oldY = evt.getY();
@@ -522,6 +530,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
             final AlignmentAnnotation aaa = aa[selectedRow];
             cbmi.addItemListener(new ItemListener()
             {
+              @Override
               public void itemStateChanged(ItemEvent e)
               {
                 if (aaa.groupRef != null)
@@ -545,6 +554,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       aa[selectedRow].groupRef.isShowConsensusHistogram());
               chist.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -564,6 +574,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       aa[selectedRow].groupRef.isShowSequenceLogo());
               cprofl.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -585,6 +596,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       aa[selectedRow].groupRef.isNormaliseSequenceLogo());
               cprofn.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -608,6 +620,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       av.isShowConsensusHistogram());
               chist.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -631,6 +644,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       av.isShowSequenceLogo());
               cprof.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -655,6 +669,7 @@ public class AnnotationLabels extends Panel implements ActionListener,
                       av.isNormaliseSequenceLogo());
               cprofn.addItemListener(new ItemListener()
               {
+                @Override
                 public void itemStateChanged(ItemEvent e)
                 {
                   // TODO: pass on reference
@@ -794,11 +809,13 @@ public class AnnotationLabels extends Panel implements ActionListener,
     }
   }
 
+  @Override
   public void update(Graphics g)
   {
     paint(g);
   }
 
+  @Override
   public void paint(Graphics g)
   {
     int w = getSize().width;
diff --git a/src/jalview/appletgui/IdPanel.java b/src/jalview/appletgui/IdPanel.java
index 8f24f11..b4ed6d9 100755
--- a/src/jalview/appletgui/IdPanel.java
+++ b/src/jalview/appletgui/IdPanel.java
@@ -100,6 +100,7 @@ public class IdPanel extends Panel implements MouseListener,
 
   Tooltip tooltip;
 
+  @Override
   public void mouseMoved(MouseEvent e)
   {
     int seq = alignPanel.seqPanel.findSeq(e);
@@ -188,6 +189,7 @@ public class IdPanel extends Panel implements MouseListener,
     tooltiptext = null;
   }
 
+  @Override
   public void mouseDragged(MouseEvent e)
   {
     mouseDragging = true;
@@ -207,6 +209,7 @@ public class IdPanel extends Panel implements MouseListener,
     alignPanel.paintAlignment(false);
   }
 
+  @Override
   public void mouseClicked(MouseEvent e)
   {
     if (e.getClickCount() < 2)
@@ -270,6 +273,7 @@ public class IdPanel extends Panel implements MouseListener,
     }
   }
 
+  @Override
   public void mouseEntered(MouseEvent e)
   {
     if (scrollThread != null)
@@ -278,6 +282,7 @@ public class IdPanel extends Panel implements MouseListener,
     }
   }
 
+  @Override
   public void mouseExited(MouseEvent e)
   {
     if (av.getWrapAlignment())
@@ -297,6 +302,7 @@ public class IdPanel extends Panel implements MouseListener,
     }
   }
 
+  @Override
   public void mousePressed(MouseEvent e)
   {
     if (e.getClickCount() > 1)
@@ -401,6 +407,7 @@ public class IdPanel extends Panel implements MouseListener,
 
   }
 
+  @Override
   public void mouseReleased(MouseEvent e)
   {
     if (scrollThread != null)
@@ -455,6 +462,7 @@ public class IdPanel extends Panel implements MouseListener,
       running = false;
     }
 
+    @Override
     public void run()
     {
       running = true;