From: hansonr <hansonr@STO24954W.ad.stolaf.edu>
Date: Wed, 28 Aug 2019 05:27:09 +0000 (-0500)
Subject: JalviewJS2 optional headless, output
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=113cc13d931734b2fc55e4b13474b6c863008e12;p=jalview.git

JalviewJS2 optional headless, output

 commented out unless desired for testing
---

diff --git a/src/jalview/bin/JalviewJS2.java b/src/jalview/bin/JalviewJS2.java
index 1ed9f27..6f69f8a 100644
--- a/src/jalview/bin/JalviewJS2.java
+++ b/src/jalview/bin/JalviewJS2.java
@@ -33,12 +33,24 @@ public class JalviewJS2
   {
     if (args.length == 0)
     {
-      args = new String[] { "open", "examples/uniref50.fa", "features",
+      args = new String[] {
+        //  "headless",
+          "open", "examples/uniref50.fa",
+          "features",
           "examples/exampleFeatures.txt"
           , "noannotation"
           , "showoverview"
+        //  , "png", "test-bh.png"
       };
     }
+
+    // String cmds = "nodisplay -open examples/uniref50.fa -sortbytree -props
+    // test/jalview/io/testProps.jvprops -colour zappo "
+    // + "-jabaws http://www.compbio.dundee.ac.uk/jabaws -nosortbytree "
+    // + "-features examples/testdata/plantfdx.features -annotations
+    // examples/testdata/plantfdx.annotations -tree
+    // examples/testdata/uniref50_test_tree";
+    // args = cmds.split(" ");
     Jalview.main(args);
 	//showFocusTimer();
 }