From: Jim Procter <jprocter@issues.jalview.org>
Date: Thu, 4 Aug 2016 19:53:40 +0000 (+0100)
Subject: JAL-2046 stack trace for implementation warning
X-Git-Tag: Release_2_10_0~47^2~4^2~43^2~62
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=134291d04042b3d7252598a9f73753f40da08a18;p=jalview.git

JAL-2046 stack trace for implementation warning
---

diff --git a/src/jalview/datamodel/Sequence.java b/src/jalview/datamodel/Sequence.java
index a857712..88f4308 100755
--- a/src/jalview/datamodel/Sequence.java
+++ b/src/jalview/datamodel/Sequence.java
@@ -307,8 +307,9 @@ public class Sequence extends ASequence implements SequenceI
               && datasetSequence.getSequenceFeatures() != null
               && datasetSequence.getSequenceFeatures().length > 0)
       {
-        System.err
-              .println("Warning: JAL-2046 side effect ? Possible implementation error: overwriting dataset sequence features by setting sequence features on alignment");
+        new Exception(
+                "Warning: JAL-2046 side effect ? Possible implementation error: overwriting dataset sequence features by setting sequence features on alignment")
+                .printStackTrace();
       }
       datasetSequence.setSequenceFeatures(features);
     }