From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 28 Sep 2005 15:08:50 +0000 (+0000)
Subject: 2.06
X-Git-Tag: Release_2_06~5
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=14e8b69c8c3c474d77dbdf317565bbf37094185a;p=jalview.git

2.06
---

diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html
index f4da5b5..d66c14c 100755
--- a/help/html/whatsNew.html
+++ b/help/html/whatsNew.html
@@ -11,32 +11,44 @@
 <p>If you were familiar with the original Jalview, here is a list of important
   features you should know about the current development:</p>
 <ul>
-  <li>Editing sequences is no longer the default when mouse clicking the alignment. 
-    Instead, mouse clicking on the alignment creates a &quot;selection region&quot; 
+  <li>Editing sequences is no longer the default when mouse clicking the alignment.
+    Instead, mouse clicking on the alignment creates a &quot;selection region&quot;
     which may be full sequences or groups of residues.</li>
-  <li>To insert or edit the gaps in one sequence in alignment, the &quot;Shift&quot; 
+  <li>To insert or edit the gaps in one sequence in alignment, the &quot;Shift&quot;
     key must be held down when dragging the mouse.</li>
-  <li>To insert or edit gaps for a group of sequences, the &quot;Alt&quot; key 
+  <li>To insert or edit gaps for a group of sequences, the &quot;Alt&quot; key
     (or in X windows the &quot;Control&quot; key) must be held down.</li>
-  <li>Selecting colour schemes in the colour menu either sets just the &quot;background&quot; 
-    colourscheme for the alignment, or - when the tickbox &quot;Apply colour to 
-    all groups&quot; is ticked, applies the scheme to the background and all groups 
+  <li>Selecting colour schemes in the colour menu either sets just the &quot;background&quot;
+    colourscheme for the alignment, or - when the tickbox &quot;Apply colour to
+    all groups&quot; is ticked, applies the scheme to the background and all groups
     defined on the alignment.</li>
-  <li>Use the right mouse button (apple and click on the Mac) whilst the pointer 
-    is within the selection area to access the &quot;define&quot; region menu 
-    to define a new region, give it a name, and change its colourscheme and display 
+  <li>Use the right mouse button (apple and click on the Mac) whilst the pointer
+    is within the selection area to access the &quot;define&quot; region menu
+    to define a new region, give it a name, and change its colourscheme and display
     properties.</li>
   <li>Conservation is automatically updated whenever the alignment is edited</li>
   <li>There is no &quot;quick draw&quot; option</li>
   <li>Edits can be undone, and redone!</li>
 </ul>
 <table border="1">
-  <tr> 
+  <tr>
     <td><div align="center"><em><strong>Release</strong></em></div></td>
     <td><div align="center"><em><strong>New Features</strong></em></div></td>
     <td><div align="center"><em><strong>Issues Resolved</strong></em></div></td>
   </tr>
   <tr>
+    <td><div align="center"><strong>2.06</strong><br>
+        28/9/05</div></td>
+    <td><ul>
+        <li>View annotations in wrapped mode</li>
+        <li>More options for PCA viewer</li>
+      </ul></td>
+    <td><ul>
+        <li>GUI bugs resolved</li>
+        <li>Runs with -nodisplay from command line</li>
+      </ul></td>
+  </tr>
+  <tr>
     <td><div align="center"><strong>2.05b</strong><br>
         15/9/05</div></td>
     <td><ul>
@@ -50,7 +62,7 @@
         <li>Several GUI bugs resolved</li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td><div align="center"><strong>2.05</strong><br>
         30/8/05</div></td>
     <td><ul>
@@ -60,7 +72,7 @@
         <li>Several GUI bugs resolved</li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td><div align="center"><strong>2.04</strong><br>
         24/8/05</div></td>
     <td><ul>
@@ -71,7 +83,7 @@
         <li>Improved loading of Jalview files</li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td> <div align="center"><strong>2.03</strong><br>
         18/8/05</div></td>
     <td><ul>
@@ -87,7 +99,7 @@
         <li>InstallAnywhere download for Sparc Solaris</li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td> <div align="center"><strong>2.02</strong><br>
         18/7/05</div></td>
     <td>&nbsp;</td>
@@ -95,7 +107,7 @@
         <li>Copy &amp; Paste order of sequences maintains alignment order.</li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td><div align="center"><strong>2.01</strong><br>
         12/7/05</div></td>
     <td><ul>
@@ -110,12 +122,12 @@
         <li>FileChooser sorts columns.</li>
         <li>Can remove groups one by one.</li>
         <li>Filechooser icons installed.</li>
-        <li>Finder ignores return character when searching. Return key will initiate 
+        <li>Finder ignores return character when searching. Return key will initiate
           a search.<br>
         </li>
       </ul></td>
   </tr>
-  <tr> 
+  <tr>
     <td> <div align="center"><strong>2.0</strong><br>
         20/6/05</div></td>
     <td ><ul>