From: amwaterhouse Date: Thu, 7 Apr 2005 10:39:04 +0000 (+0000) Subject: amino acid gifs X-Git-Tag: Release_2_0~480 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=15c9b73af630bf89e6d4517f1898233fc0bb3949;p=jalview.git amino acid gifs --- diff --git a/help/html/misc/alachem.gif b/help/html/misc/alachem.gif new file mode 100755 index 0000000..2fe4c61 Binary files /dev/null and b/help/html/misc/alachem.gif differ diff --git a/help/html/misc/aminoAcids.html b/help/html/misc/aminoAcids.html index f1e597a..9e25c35 100755 --- a/help/html/misc/aminoAcids.html +++ b/help/html/misc/aminoAcids.html @@ -16,150 +16,276 @@ td {


- - +
+ - - + + + + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + - + + + - + + + - + + + - + - + + + - + + + - + - + + +
A AlaAlanineGCT, GCC, GCA, GCGAlaninealiphatic
+ hydrophobic
+ neutral 		GCT
+ GCC
+ GCA
+ GCG
B   either aspartic acid or asparagine    
C Cys CysteineTGT, TGCpolar
+ hydrophobic
+ neutral 		TGT
+ TGC
D Asp Aspartic AcidGAT, GACpolar
+ hydrophilic
+ charged (-) 		GAT
+ GAC
E Glu Glutamic AcidGAA, GAGpolar
+ hydrophilic
+ charged (-) 		GAA
+ GAG
F Phe PhenylalanineTTT, TTCaromatic
+ hydrophobic
+ neutral		TTT
+ TTC
G Gly GlycineGGT, GGC, GGA, GGG GGT
+ GGC
+ GGA
+ GGG
H His HistidineCAT, CACaromatic
+ polar
+ hydrophilic
+ charged (+) 		CAT
+ CAC
I Ile IsoleucineATT, ATC, ATAaliphatic
+ hydrophobic
+ neutral 		ATT
+ ATC
+ ATA
K Lys LysineAAA, AAG AAA
+ AAG
L Leu LeucineTTG, TTA, CTT, CTC, CTA, CTGaliphatic
+ hydrophobic
+ neutral 		TTG
+ TTA
+ CTT
+ CTC
+ CTA
+ CTG
M Met Methioninehydrophobic
+ neutral 		ATG
N Asn AsparagineAAT, AACpolar
+ hydrophilic
+ neutral 		AAT
+ AAC
P Pro ProlineCCT, CCC, CCA, CCGhydrophobic
+ neutral		CCT
+ CCC
+ CCA
+ CCG
Q Gln GlutamineCAA, CAGpolar
+ hydrophilic
+ neutral		CAA
+ CAG
R Arg ArginineCGT, CGC, CGA, CGG, AGA, AGGpolar
+ hydrophilic
+ charged (+) 		CGT
+ CGC
+ CGA
+ CGG
+ AGA
+ AGG
S Ser SerineTCT, TCC, TCA, TCG, AGT, AGCpolar
+ hydrophilic
+ neutral 		TCT
+ TCC
+ TCA
+ TCG
+ AGT
+ AGC
T Thr ThreonineACT, ACC, ACA, ACGpolar
+ hydrophilic
+ neutral 		ACT
+ ACC
+ ACA
+ ACG
V Val ValineGTT, GTC, GTA, GTGaliphatic
+ hydrophobic
+ neutral 		GTT
+ GTC
+ GTA
+ GTG
W Trp Tryptophanaromatic
+ hydrophobic
+ neutral		 TGG
X   UNKNOWN    
Y Tyr TyrosineTAT, TACaromatic
+ polar
+ hydrophobic 		TAT
+ TAC
Z   either glutamic acid or glutamine   
  End TerminatorTAA, TAG, TGA TAA
+ TAG
+ TGA		 


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