From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 18 May 2016 12:18:09 +0000 (+0100)
Subject: JAL-2049 set sequence feature group to "Jalview" for computed protein
X-Git-Tag: Release_2_10_0~220^2
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=1861ba00ddfe2274a788ad03f82c44b6523ad8b7;p=jalview.git

JAL-2049 set sequence feature group to "Jalview" for computed protein
variants
---

diff --git a/src/jalview/analysis/AlignmentUtils.java b/src/jalview/analysis/AlignmentUtils.java
index 92753b9..fba023f 100644
--- a/src/jalview/analysis/AlignmentUtils.java
+++ b/src/jalview/analysis/AlignmentUtils.java
@@ -1936,7 +1936,7 @@ public class AlignmentUtils
       // set score to 0f so 'graduated colour' option is offered! JAL-2060
       SequenceFeature sf = new SequenceFeature(
               SequenceOntologyI.SEQUENCE_VARIANT, desc, peptidePos,
-              peptidePos, 0f, null);
+              peptidePos, 0f, "Jalview");
       StringBuilder attributes = new StringBuilder(32);
       String id = (String) var.variant.getValue(ID);
       if (id != null)