From: Jim Procter <jprocter@issues.jalview.org>
Date: Sun, 28 Jun 2015 16:18:59 +0000 (+0100)
Subject: JAL-1705 add concrete ENSEMBL sequence fetchers
X-Git-Tag: Release_2_10_0~296^2~90^2~9
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=1a28391e79e7b8e84576336f59ff3038a8e6e85b;p=jalview.git

JAL-1705 add concrete ENSEMBL sequence fetchers
---

diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java
index 8776747..656fa1d 100644
--- a/src/jalview/ws/SequenceFetcher.java
+++ b/src/jalview/ws/SequenceFetcher.java
@@ -55,6 +55,12 @@ public class SequenceFetcher extends ASequenceFetcher
 
   public SequenceFetcher(boolean addDas)
   {
+    addDBRefSourceImpl(jalview.ext.ensembl.EnsemblProtein.class);
+    addDBRefSourceImpl(jalview.ext.ensembl.EnsemblTranscript.class);
+    addDBRefSourceImpl(jalview.ext.ensembl.EnsemblCds.class);
+    addDBRefSourceImpl(jalview.ext.ensembl.EnsemblGenome.class);
+    addDBRefSourceImpl(jalview.ext.ensembl.EnsemblCdna.class);
+
     addDBRefSourceImpl(jalview.ws.dbsources.EmblSource.class);
     addDBRefSourceImpl(jalview.ws.dbsources.EmblCdsSouce.class);
     addDBRefSourceImpl(jalview.ws.dbsources.Uniprot.class);