From: tcofoegbu <tcnofoegbu@dundee.ac.uk>
Date: Fri, 18 Sep 2015 14:06:02 +0000 (+0100)
Subject: JAL-1506 revised implementation to clear only selected columns after a delete operation
X-Git-Tag: Release_2_10_0~398
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=1b06ffc30dc430351081ecf4bc1515f9448e7ec4;p=jalview.git

JAL-1506 revised implementation to clear only selected columns after a delete operation
---

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index e40e936..8f9e49e 100644
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -2386,10 +2386,10 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
       {
         return;
       }
-      viewport.getColumnSelection().removeElements(sg.getStartRes(),
-              sg.getEndRes() + 1);
     }
 
+    viewport.getColumnSelection().removeElements(sg.getStartRes(),
+            sg.getEndRes() + 1);
     SequenceI[] cut = sg.getSequences()
             .toArray(new SequenceI[sg.getSize()]);
 
@@ -2401,7 +2401,6 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
     viewport.setSelectionGroup(null);
     viewport.sendSelection();
     viewport.getAlignment().deleteGroup(sg);
-    viewport.getColumnSelection().clear();
 
     viewport.firePropertyChange("alignment", null, viewport.getAlignment()
             .getSequences());