From: Jim Procter <jprocter@compbio.dundee.ac.uk>
Date: Fri, 11 Oct 2013 10:40:23 +0000 (+0100)
Subject: JAL-1114 API javadoc
X-Git-Tag: Release_2_8_0b1~1^2~44^2~4
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=20d2885e734c1bf7c845076c5d7597994407f00a;p=jalview.git

JAL-1114 API javadoc
---

diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java
index aded6e8..5f9b049 100755
--- a/src/jalview/datamodel/SequenceI.java
+++ b/src/jalview/datamodel/SequenceI.java
@@ -97,21 +97,21 @@ public interface SequenceI
   public String getSequenceAsString();
 
   /**
-   * get a range on the seuqence as a string
+   * get a range on the sequence as a string
    * 
    * @param start
-   *          DOCUMENT ME!
+   *          position relative to start of sequence including gaps (from 0)
    * @param end
-   *          DOCUMENT ME!
+   *          position relative to start of sequence including gaps (from 0)
    * 
-   * @return DOCUMENT ME!
+   * @return String containing all gap and symbols in specified range
    */
   public String getSequenceAsString(int start, int end);
 
   /**
-   * DOCUMENT ME!
+   * Get the sequence as a character array
    * 
-   * @return DOCUMENT ME!
+   * @return seqeunce and any gaps
    */
   public char[] getSequence();