From: tcofoegbu <tcnofoegbu@dundee.ac.uk>
Date: Fri, 21 Aug 2015 10:27:19 +0000 (+0100)
Subject: JAL-1443 bug fix for loading pasted alignments from clipboard via the file loader
X-Git-Tag: Release_2_10_0~525
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=2106c65bdae427b0b311f6dea60f337e1f601613;p=jalview.git

JAL-1443 bug fix for loading pasted alignments from clipboard via the file loader
---

diff --git a/src/jalview/io/FileLoader.java b/src/jalview/io/FileLoader.java
index 65f2a57..870d438 100755
--- a/src/jalview/io/FileLoader.java
+++ b/src/jalview/io/FileLoader.java
@@ -337,7 +337,7 @@ public class FileLoader implements Runnable
           }
         }
 
-        if ((al != null) && (al.getHeight() > 0))
+        if ((al != null) && (al.getHeight() > 0) && al.hasValidSequence())
         {
           // construct and register dataset sequences
           for (SequenceI sq : al.getSequences())