From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 18 Jan 2007 17:22:38 +0000 (+0000)
Subject: Add the last sequence before annotations
X-Git-Tag: Release_2_3~476
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=2202f8ba9f000c811358937a571c5cd4a017a403;p=jalview.git

Add the last sequence before annotations
---

diff --git a/src/jalview/io/FastaFile.java b/src/jalview/io/FastaFile.java
index d5a6a66..71d372e 100755
--- a/src/jalview/io/FastaFile.java
+++ b/src/jalview/io/FastaFile.java
@@ -93,7 +93,6 @@ public class FastaFile extends AlignFile
 
                       annotations.addElement(aa);
                     }
-                    annotation = true;
                   }
                   else
                     annotation = false;
@@ -117,6 +116,9 @@ public class FastaFile extends AlignFile
                     firstLine = false;
 
                     sb = new StringBuffer();
+
+                    if (line.startsWith(">#_"))
+                      annotation = true;
                 }
                 else
                 {