From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 18 Jul 2016 13:20:07 +0000 (+0100)
Subject: JAL-2121 cleanup TODO
X-Git-Tag: Release_2_10_0~138^2~5
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=22877d563a502ec3b249e2260a9122bd94b918af;p=jalview.git

JAL-2121 cleanup TODO
---

diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java
index d737bd5..32bb761 100755
--- a/src/jalview/datamodel/Alignment.java
+++ b/src/jalview/datamodel/Alignment.java
@@ -1721,6 +1721,7 @@ public class Alignment implements AlignmentI
           boolean preserveUnmappedGaps)
   {
     // TODO should this method signature be the one in the interface?
+    // JBPComment - yes - neither flag is used, so should be deleted.
     boolean thisIsNucleotide = this.isNucleotide();
     boolean thatIsProtein = !al.isNucleotide();
     if (!thatIsProtein && !thisIsNucleotide)