From: tva <tva@10.205.251.175>
Date: Wed, 5 Jun 2019 15:23:56 +0000 (+0100)
Subject: JAL-3285 method call change to HMMBuild not included in merge
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=23a74ce0929269fd0bb5073921eee55eed6a5e68;p=jalview.git

JAL-3285 method call change to HMMBuild not included in merge
---

diff --git a/src/jalview/hmmer/HMMBuild.java b/src/jalview/hmmer/HMMBuild.java
index b3cca40..ee133ff 100644
--- a/src/jalview/hmmer/HMMBuild.java
+++ b/src/jalview/hmmer/HMMBuild.java
@@ -189,8 +189,7 @@ public class HMMBuild extends HmmerCommand
       else
       {
         SequenceI[] sel = ((SequenceGroup) ac)
-                .getSelectionAsNewSequences((AlignmentI) ac.getContext(),
-                        false);
+						.getSelectionAsNewSequences((AlignmentI) ac.getContext());
         for (SequenceI seq : sel)
         {
           copy.add(seq);