From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 21 Dec 2016 14:51:43 +0000 (+0000)
Subject: JAL-2361 Blosum is enabled for peptide
X-Git-Tag: Release_2_10_3b1~357^2~39
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=2470d1b4ccaab07f510516d72bee6067fbab3e33;p=jalview.git

JAL-2361 Blosum is enabled for peptide
---

diff --git a/src/jalview/schemes/Blosum62ColourScheme.java b/src/jalview/schemes/Blosum62ColourScheme.java
index 5eabc75..d68791c 100755
--- a/src/jalview/schemes/Blosum62ColourScheme.java
+++ b/src/jalview/schemes/Blosum62ColourScheme.java
@@ -20,7 +20,6 @@
  */
 package jalview.schemes;
 
-import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AnnotatedCollectionI;
 import jalview.datamodel.SequenceCollectionI;
 import jalview.datamodel.SequenceI;
@@ -123,25 +122,4 @@ public class Blosum62ColourScheme extends ResidueColourScheme
   {
     return JalviewColourScheme.Blosum62.toString();
   }
-
-  /**
-   * Answers true if Conservation annotation is present, else false
-   */
-  @Override
-  public boolean isApplicableTo(AnnotatedCollectionI ac)
-  {
-    AlignmentAnnotation[] anns = ac.getAlignmentAnnotation();
-    if (anns == null)
-    {
-      return false;
-    }
-    for (AlignmentAnnotation ann : anns)
-    {
-      if ("Conservation".equals(ann.label))
-      {
-        return true;
-      }
-    }
-    return false;
-  }
 }