What's new ?

From: amwaterhouse Date: Thu, 18 Aug 2005 16:04:56 +0000 (+0000) Subject: Add release history to whats new X-Git-Tag: Release_2_04~43 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=24974fd5af8b5c2f223cc8f8c0f2f4beb8c4d509;p=jalview.git Add release history to whats new --- diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index 965edea..b35c9ae 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -1,35 +1,94 @@ - -What's new ? - -

What's new ?

If you are reading this then you will already have seen some of the recent changes - made to Jalview.
- Jalview takes advantage of some of the more recent user interface developments - in the Java programming language. For instance Jalview is now a multi windowed - application, this keeps all your Jalview windows neatly together in one main - application window.

If you were familiar with the original Jalview, here is a list of important - features you should know about the current development:

Editing sequences is no longer the default when mouse clicking the alignment. - Instead, mouse clicking on the alignment creates a "selection region" - which may be full sequences or groups of residues.
To insert or edit the gaps in one sequence in alignment, the - "Shift" key must be held down when dragging the mouse.
To insert or edit gaps for a group of sequences, the - "Alt" key (or in X windows the "Control" - key) must be held down.
Selecting colour schemes in the colour menu either sets just the - "background" colourscheme for the alignment, or - when - the tickbox "Apply colour to all groups" is ticked, - applies the scheme to the background and all groups defined on the alignment.
Use the right mouse button (apple and click on the Mac) whilst - the pointer is within the selection area to access the "define" region menu to - define a new region, give it a name, and change its colourscheme and display - properties.
Conservation is automatically updated whenever the alignment is edited
There is no "quick draw" option
Edits can be undone, and redone!

- - + +What's new ? + +

What's new ?

If you are reading this then you will already have seen some of the recent changes + made to Jalview.
+ Jalview takes advantage of some of the more recent user interface developments + in the Java programming language. For instance Jalview is now a multi windowed + application, this keeps all your Jalview windows neatly together in one main + application window.

If you were familiar with the original Jalview, here is a list of important + features you should know about the current development:

Editing sequences is no longer the default when mouse clicking the alignment. + Instead, mouse clicking on the alignment creates a "selection region" + which may be full sequences or groups of residues.
To insert or edit the gaps in one sequence in alignment, the "Shift" + key must be held down when dragging the mouse.
To insert or edit gaps for a group of sequences, the "Alt" key + (or in X windows the "Control" key) must be held down.
Selecting colour schemes in the colour menu either sets just the "background" + colourscheme for the alignment, or - when the tickbox "Apply colour to + all groups" is ticked, applies the scheme to the background and all groups + defined on the alignment.
Use the right mouse button (apple and click on the Mac) whilst the pointer + is within the selection area to access the "define" region menu + to define a new region, give it a name, and change its colourscheme and display + properties.
Conservation is automatically updated whenever the alignment is edited
There is no "quick draw" option
Edits can be undone, and redone!

+ + + + + + + + + + + + + + + + + + + + + + + + + + +

Release	New Features	Issues Resolved
2.0 + 20/6/05	+ New codebase +
2.01 + 12/7/05	+ Use delete key for deleting selection. + Use Mouse wheel to scroll sequences. + Help file updated to describe how to add alignment annotations. + Version and build date written to build properties file. + InstallAnywhere installation will check for updates at launch of Jalview. +	+ Delete gaps bug fixed. + FileChooser sorts columns. + Can remove groups one by one. + Filechooser icons installed. + Finder ignores return character when searching. Return key will initiate + a search. + +
2.02 + 18/7/05		+ Copy & Paste order of sequences maintains alignment order. +
2.03 + 18/8/05	+ Set Proxy server name and port in preferences + Multiple URL links from sequence ids + User Defined Colours can have a scheme name and added to Colour Menu + Choose to ignore gaps in consensus calculation + Unix users can set default web browser + Runs without GUI for batch processing + Dynamically generated Web Service Menus +	+ InstallAnywhere download for Sparc Solaris +

+ +