From: James Procter <j.procter@dundee.ac.uk>
Date: Fri, 29 Sep 2023 16:59:02 +0000 (+0100)
Subject: JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example
X-Git-Tag: Release_2_11_4_0~150^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=287eeb77a52d99c8cefea44b9ad509b7ff3c98ce;p=jalview.git

JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example
---

diff --git a/help/help/html/features/clarguments-basic.html b/help/help/html/features/clarguments-basic.html
index c82cb20..238366c 100644
--- a/help/help/html/features/clarguments-basic.html
+++ b/help/help/html/features/clarguments-basic.html
@@ -315,11 +315,11 @@
   <br/>
   The value can also be specified as a sub-value:
   <pre>
-  jalview --open examples/uniref50.fa --structure [seqid=FER1+SPIOL,structureviewer=jmol,tempfac=plddt]examples/AlphaFold/AF-P00221-F1-model_v4.pdb
+  jalview --open examples/uniref50.fa --structure [seqid=FER1_SPIOL,structureviewer=jmol,tempfac=plddt]examples/AlphaFold/AF-P00221-F1-model_v4.pdb
   </pre>
   which is equivalent to
   <pre>
-  jalview --open examples/uniref50.fa --structure examples/AlphaFold/AF-P00221-F1-model_v4.pdb --tempfac plddt --seqid FER1+SPIOL
+  jalview --open examples/uniref50.fa --structure examples/AlphaFold/AF-P00221-F1-model_v4.pdb --tempfac plddt --seqid FER1_SPIOL
    --structureviewer jmol
   </pre>