From: jprocter <Jim Procter>
Date: Mon, 7 Aug 2006 12:20:12 +0000 (+0000)
Subject: added commented out seqStrings comment.
X-Git-Tag: Release_2_1~154
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=3045b37e365018c7fe5a97fec36994eb22c379a4;p=jalview.git

added commented out seqStrings comment.
---

diff --git a/src/jalview/appletgui/TreePanel.java b/src/jalview/appletgui/TreePanel.java
index ddfcbe3..9c71a15 100755
--- a/src/jalview/appletgui/TreePanel.java
+++ b/src/jalview/appletgui/TreePanel.java
@@ -134,11 +134,11 @@ public class TreePanel extends Frame implements ActionListener, ItemListener
         {
           int start, end;
           SequenceI [] seqs;
-          CigarArray seqStrings = null;
-        //  if (av.hasHiddenColumns)
-          {
-        //    seqStrings = av.getSelectionAsString();
-          }
+          String[] seqStrings = null;
+//          if (av.hasHiddenColumns)
+  //        {
+    //        seqStrings = av.getAlignmentView(av.getSelectionGroup()!=null); // av.getSelectionAsString();
+      //    }
 
           if(av.getSelectionGroup()==null)
           {
@@ -153,7 +153,7 @@ public class TreePanel extends Frame implements ActionListener, ItemListener
             seqs = av.getSelectionGroup().getSequencesInOrder(av.alignment);
           }
 
-          tree = new NJTree(seqs, seqStrings, type, pwtype, start, end);
+          tree = new NJTree(seqs, null, type, pwtype, start, end);
         }
 
       tree.reCount(tree.getTopNode());