From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 10 Dec 2004 14:42:12 +0000 (+0000)
Subject: No longer exclusive to SequenceGroups
X-Git-Tag: Release_2_0~844
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=342dfe93ddf709ca224f07686cf1032b82e93d70;p=jalview.git

No longer exclusive to SequenceGroups
---

diff --git a/src/jalview/schemes/ConservationColourScheme.java b/src/jalview/schemes/ConservationColourScheme.java
index 1cbc0d4..7acc722 100755
--- a/src/jalview/schemes/ConservationColourScheme.java
+++ b/src/jalview/schemes/ConservationColourScheme.java
@@ -29,12 +29,11 @@ public class ConservationColourScheme extends ResidueColourScheme {
   public int inc = 30;
   int colourThreshold =  7;
 
-  public ConservationColourScheme(SequenceGroup sg)
+  public ConservationColourScheme(Conservation cons, ColourSchemeI oldcs)
   {
     super();
-    this.conserve = sg.getConservation();
-    colourThreshold = 7;
-    this.cs = sg.cs;
+    conserve = cons;
+    cs = oldcs;
   }
 
   public void setColours(DrawableSequence seq, int j) {