From: Jim Procter Date: Fri, 23 Jan 2015 15:32:05 +0000 (+0000) Subject: JAL-1551 formatting X-Git-Tag: Jalview_2_9~108^2~1 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=34c7f4ff70c1f1bd9a3f25ed41b50381830b6421;p=jalview.git JAL-1551 formatting --- diff --git a/src/jalview/io/FileParse.java b/src/jalview/io/FileParse.java index f155e51..764715f 100755 --- a/src/jalview/io/FileParse.java +++ b/src/jalview/io/FileParse.java @@ -22,8 +22,17 @@ package jalview.io; import jalview.util.MessageManager; -import java.io.*; -import java.net.*; +import java.io.BufferedReader; +import java.io.File; +import java.io.FileInputStream; +import java.io.FileReader; +import java.io.IOException; +import java.io.InputStream; +import java.io.InputStreamReader; +import java.io.Reader; +import java.io.StringReader; +import java.net.MalformedURLException; +import java.net.URL; import java.util.zip.GZIPInputStream; /** @@ -99,7 +108,9 @@ public class FileParse throw new Error(MessageManager.getString("error.implementation_error_null_fileparse")); } if (from == this) + { return; + } index = ++from.index; inFile = from.inFile; suffixSeparator = from.suffixSeparator; @@ -281,7 +292,9 @@ public class FileParse { checkURLSource(fileStr); if (suffixSeparator == '#') + { extractSuffix(fileStr); // URL lref is stored for later reference. + } } catch (IOException e) { String suffixLess = extractSuffix(fileStr); @@ -323,7 +336,9 @@ public class FileParse { String suffixLess = extractSuffix(fileStr); if (suffixLess != null) + { is = getClass().getResourceAsStream("/" + suffixLess); + } } if (is != null) { @@ -371,7 +386,9 @@ public class FileParse public String nextLine() throws IOException { if (!error) + { return dataIn.readLine(); + } throw new IOException(MessageManager.formatMessage("exception.invalid_source_stream", new String[]{errormessage})); }