From: jprocter <Jim Procter>
Date: Tue, 2 Jun 2009 09:26:31 +0000 (+0000)
Subject: new jalview paper and prep for release
X-Git-Tag: Jalview_2_4_0b2~34
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=36f06cf52feeabc8cfde2e3207a2bc3871ded57d;p=jalview.git

new jalview paper and prep for release
---

diff --git a/help/html/index.html b/help/html/index.html
index adc1fa5..a349349 100755
--- a/help/html/index.html
+++ b/help/html/index.html
@@ -6,13 +6,14 @@
 <br><br>
 <strong>Jalview Documentation</strong></font>
 <br><br>
-Jalview (2004) is a fast Java multiple alignment editor and analysis tool. It
+Jalview (2009) is a fast Java multiple alignment editor and analysis tool. It
 features many of the functions of <a href="http://www.compbio.dundee.ac.uk/Software/Amas/amas.html">AMAS</a>,
 for the analysis of sub-families and the prediction of functional sites, but is
 fully interactive. (View the <a href="http://www.jalview.org">Jalview homepage</a>).
 <p></p>
-<p> If you use Jalview in your work, please cite the bioinformatics paper: </p>
-<p>Clamp, M., Cuff, J., Searle, S. M. and Barton, G. J. (2004), "The Jalview
-  Java Alignment Editor", Bioinformatics, 20, 426-7.</p>
+<p> If you use Jalview in your work, please cite the Jalview 2 paper in Bioinformatics: </p>
+<p>Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M., Barton, G.J (2009), <br>
+   &quot;Jalview version 2: A Multiple Sequence Alignment and Analysis Workbench,&quot;<br>
+   <em>Bioinformatics</em> doi: 10.1093/bioinformatics/btp033
 </body>
 </html>
diff --git a/help/html/releases.html b/help/html/releases.html
index feb34ee..d408091 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -17,6 +17,18 @@
 		</td>
 	</tr>
 	<tr>
+	<td>
+	<div align="center"><strong>2.4.0.b2</strong><br>
+		2/6/2009</div>
+	</td>
+	<td>
+	<ul><li>Experimental support for google analytics usage tracking.</li>
+	</ul>
+	</td>
+	<td>
+	</td>
+	</tr>
+	<tr>
 	    <td>
 	      <div align="center"><strong>2.4 bugfixes</strong><br>
 		12/11/2008</div>
@@ -34,7 +46,7 @@
 		<td>
 		
 		<div align="center"><strong>2.4</strong><br>
-		27/8//2008</div>
+		27/8/2008</div>
 		</td>
 		<td>
 			<em>User Interface</em>