From: Jim Procter <jprocter@compbio.dundee.ac.uk>
Date: Fri, 7 Jun 2013 12:24:47 +0000 (+0100)
Subject: JAL-945 uniquify prior to submission
X-Git-Tag: Jalview_2_9~248^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=381ab4041500f6b7f07c84b87f0fa1adf71013ae;p=jalview.git

JAL-945 uniquify prior to submission
---

diff --git a/src/jalview/ws/rest/RestJob.java b/src/jalview/ws/rest/RestJob.java
index d2a0a05..72dbb64 100644
--- a/src/jalview/ws/rest/RestJob.java
+++ b/src/jalview/ws/rest/RestJob.java
@@ -87,7 +87,7 @@ public class RestJob extends AWsJob
     // get sequences for the alignmentI
     // get groups trimmed to alignment columns
     // get any annotation trimmed to start/end columns, too.
-
+    squniq = jalview.analysis.SeqsetUtils.uniquify(_input.getSequencesArray(), true);
     // prepare input
     // form alignment+groups+annotation,preprocess and then record references
     // for formatters