From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Thu, 4 Feb 2016 15:26:24 +0000 (+0000)
Subject: JAL-1544 spelling fix
X-Git-Tag: Release_2_10_0~296^2~36
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=40adaea88739e0535914a278b141dc68f27f79ce;p=jalview.git

JAL-1544 spelling fix
---

diff --git a/help/html/calculations/quality.html b/help/html/calculations/quality.html
index 4f05b06..448efef 100755
--- a/help/html/calculations/quality.html
+++ b/help/html/calculations/quality.html
@@ -44,7 +44,7 @@
     conserved BLOSUM62 score (which is higher). This value is normalised
     for each column, and then plotted on a scale from 0 to 1.
   </p>
-  <p>Multiple alignment algorithms using the BLOSUM 62 substition
+  <p>Multiple alignment algorithms using the BLOSUM 62 substitution
     matrices should, in theory, maximise alignment quality for an
     un-gapped alignment, and locally maximise quality for gapped
     alignments.</p>
diff --git a/help/html/calculations/scorematrices.html b/help/html/calculations/scorematrices.html
index 5fb900f..f6bffb0 100644
--- a/help/html/calculations/scorematrices.html
+++ b/help/html/calculations/scorematrices.html
@@ -33,7 +33,7 @@
       matrix, and (since 2.8.1) is available for Tree and PCA
       calculations.</li>
     <li><a href="#simplenucleotide">Simple Nucleotide
-        Substition</a> is a (fairly) arbitrary DNA/RNA substitution matrix.</li>
+        Substitution</a> is a (fairly) arbitrary DNA/RNA substitution matrix.</li>
     <!--  <li><a href="#conservation">Conservation Matrices</a> A range of matrices for distinguishing amino-acids by physicochemical property conservation.
 </li> -->
   </ul>