From: tcofoegbu <tcnofoegbu@dundee.ac.uk>
Date: Thu, 3 Sep 2015 15:11:24 +0000 (+0100)
Subject: house keeping
X-Git-Tag: Release_2_10_0~504
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=4200d569e2d29da8594fcd3599493889b086db56;p=jalview.git

house keeping
---

diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java
index 39aa257..2a360cc 100644
--- a/src/jalview/gui/Desktop.java
+++ b/src/jalview/gui/Desktop.java
@@ -3065,15 +3065,15 @@ public class Desktop extends jalview.jbgui.GDesktop implements
 
   }
 
-  // public static AlignFrame getCurrentAlignFrame()
-  // {
-  // return currentAlignFrame;
-  // }
-  //
-  // public static void setCurrentAlignFrame(AlignFrame currentAlignFrame)
-  // {
-  // Desktop.currentAlignFrame = currentAlignFrame;
-  // }
+  public static AlignFrame getCurrentAlignFrame()
+  {
+    return currentAlignFrame;
+  }
+
+  public static void setCurrentAlignFrame(AlignFrame currentAlignFrame)
+  {
+    Desktop.currentAlignFrame = currentAlignFrame;
+  }
 
 
 }
diff --git a/src/jalview/json/binding/biojson/v1/JalviewBioJsColorSchemeMapper.java b/src/jalview/json/binding/biojson/v1/JalviewBioJsColorSchemeMapper.java
index 094adad..92184ea 100644
--- a/src/jalview/json/binding/biojson/v1/JalviewBioJsColorSchemeMapper.java
+++ b/src/jalview/json/binding/biojson/v1/JalviewBioJsColorSchemeMapper.java
@@ -22,7 +22,7 @@ public enum JalviewBioJsColorSchemeMapper
           "zappo", new ZappoColourScheme()), TAYLOR("Taylor", "taylor",
           new TaylorColourScheme()), NUCLEOTIDE("Nucleotide", "nucleotide",
           new NucleotideColourScheme()), PURINE_PYRIMIDINE(
-          "Purine/Pyrimidine", "purine", new PurinePyrimidineColourScheme()), HELIX_PROPENCITY(
+          "Purine/Pyrimidine", "purine", new PurinePyrimidineColourScheme()), HELIX_PROPENSITY(
           "Helix Propensity", "helix", new HelixColourScheme()), TURN_PROPENSITY(
           "Turn Propensity", "turn", new TurnColourScheme()), STRAND_PROPENSITY(
           "Strand Propensity", "strand", new StrandColourScheme()), BURIED_INDEX(