From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 8 Sep 2005 15:48:45 +0000 (+0000)
Subject: Correct mouse pressed bug
X-Git-Tag: Release_2_05b~59
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=481f2cbd12ab5527f2d86bf9a08736f3d962cf19;p=jalview.git

Correct mouse pressed bug
---

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index 8a262d9..9c2aac0 100755
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -92,6 +92,7 @@ public class AnnotationPanel extends JPanel implements MouseListener,
     public void adjustPanelHeight()
     {
         // setHeight of panels
+        image = null;
         AlignmentAnnotation[] aa = av.alignment.getAlignmentAnnotation();
         int height = 0;
 
@@ -332,7 +333,10 @@ public class AnnotationPanel extends JPanel implements MouseListener,
 
         for (int i = 0; i < aa.length; i++)
         {
-            height += aa[i].height;
+            if (aa[i].visible)
+            {
+              height += aa[i].height;
+            }
 
             if (evt.getY() < height)
             {
@@ -634,6 +638,7 @@ public class AnnotationPanel extends JPanel implements MouseListener,
                 continue;
             }
 
+
             if (row.isGraph)
             {
                 // this is so that we draw the characters below the graph
@@ -841,7 +846,7 @@ public class AnnotationPanel extends JPanel implements MouseListener,
     }
 
     // used by overview window
-    public void drawGraph(Graphics g, AlignmentAnnotation aa, int width, int y)
+    public void drawGraph(Graphics g, AlignmentAnnotation aa, int width, int y, int sRes, int eRes)
     {
         g.setColor(Color.white);
         g.fillRect(0, 0, width, y);
@@ -849,7 +854,7 @@ public class AnnotationPanel extends JPanel implements MouseListener,
 
         int x = 0;
 
-        for (int j = 0; j < aa.annotations.length; j++)
+        for (int j = sRes; j < eRes; j++)
         {
             g.setColor(new Color(0, 0, 180));