From: Jim Procter <j.procter@dundee.ac.uk>
Date: Thu, 20 Oct 2022 09:50:42 +0000 (+0100)
Subject: JAL-2349 adjusted range calculation to be inclusive rather than inclusive, exclusive... 
X-Git-Tag: Release_2_11_4_0~536
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=48935da8225797aada1fe5f0863385b6b57ee67e;p=jalview.git

JAL-2349 adjusted range calculation to be inclusive rather than inclusive, exclusive of bounds
---

diff --git a/src/jalview/datamodel/ContactListImpl.java b/src/jalview/datamodel/ContactListImpl.java
index 6eb4cdb..561048e 100644
--- a/src/jalview/datamodel/ContactListImpl.java
+++ b/src/jalview/datamodel/ContactListImpl.java
@@ -10,7 +10,6 @@ public class ContactListImpl implements ContactListI
 {
   ContactListProviderI clist;
 
-
   public static ContactListI newContactList(ContactListProviderI list)
   {
     return new ContactListImpl(list);
@@ -53,7 +52,7 @@ public class ContactListImpl implements ContactListI
     cr.setFrom_column(from_column);
     cr.setTo_column(to_column);
     double tot = 0;
-    for (int i = from_column; i < to_column; i++)
+    for (int i = from_column; i <= to_column; i++)
     {
       double contact = getContactAt(i);
       tot += contact;
@@ -80,7 +79,7 @@ public class ContactListImpl implements ContactListI
     }
     if (tot > 0)
     {
-      cr.setMean(tot / (to_column - from_column));
+      cr.setMean(tot / (1 + to_column - from_column));
     }
     else
     {