From: Jim Procter <jprocter@issues.jalview.org>
Date: Fri, 13 Nov 2015 14:50:20 +0000 (+0000)
Subject: JAL-1965 fencepost patch makes wordSplit test pass

X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=4a731fe6e70e486c71c5ed9cd7281952d72cdb9c;hp=215801b5d918191341ee80e71022b3e67f2dfeb4;p=jalview.git

JAL-1965 fencepost patch makes wordSplit test pass

---

diff --git a/src/jalview/analysis/SequenceIdMatcher.java b/src/jalview/analysis/SequenceIdMatcher.java
index c0981a1..a5c161c 100755
--- a/src/jalview/analysis/SequenceIdMatcher.java
+++ b/src/jalview/analysis/SequenceIdMatcher.java
@@ -190,7 +190,7 @@ public class SequenceIdMatcher
           if (m > 0 && m - p > 5)
           {
             // split to end of word m with this delimiter
-            keys.add(new SeqIdName(name.substring(p, m - 1) + limits));
+            keys.add(new SeqIdName(name.substring(p, m) + limits));
           }
           if (namel - m > 5)
           {