From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 3 Jul 2019 17:35:15 +0000 (+0100)
Subject: JAL-3111 more whatsNew tweaks
X-Git-Tag: Release_2_11_0~2^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=4a7dd845b8ad35105ca24b531d36989ae764cdd5;p=jalview.git

JAL-3111 more whatsNew tweaks
---

diff --git a/help/help/html/whatsNew.html b/help/help/html/whatsNew.html
index c5f4f75..8150b80 100755
--- a/help/help/html/whatsNew.html
+++ b/help/help/html/whatsNew.html
@@ -31,7 +31,7 @@
     we've addressed many bugs, and also made some important changes in
     the way the Jalview desktop is installed and launched.</p>
   <ul>
-    <li><em>The Jalview Launcher and Update System</em><br />
+    <li><strong>The Jalview Launcher and Update System</strong>.
       Jalview's new installation model means you'll only need to
       download and install Jalview once. After installation, Jalview
       will automatically keep itself up to date. The launcher also sets
@@ -44,26 +44,25 @@
       href="https://en.wikipedia.org/wiki/Three_Rings_Design">Three
         Rings Design</a> for Jalview's new over the air update system: <a
       href="https://github.com/threerings/getdown">Getdown</a>.</li>
-    <li><em>VCF Support</em>. Proteins and genomic contigs with
+    <li><strong>VCF Support</strong>. Proteins and genomic contigs with
       chromosomal location annotation (such as protein coding genes
       retrieved from Ensembl) can be annotated with variants <a
       href="features/importvcf.html">imported from a local VCF file</a>.</li>
-    <li><em>Feature filters and attribute colourschemes</em>. A new
+    <li><strong>Feature filters and attribute colourschemes</strong>. A new
       <a href="features/featureschemes.html">Feature Display
         Settings</a> dialog allows filters and feature attribute based
       colourschemes to be constructed, and a new <em>filters</em> column
       added to the <a href="features/featuresettings.html">Feature
         Settings</a> dialog. Jalview's sequence feature datamodel has also
       been further optimised, and is now maintained as a separate
-      library <em><a
-        href="https://github.com/bartongroup/IntervalStoreJ">IntervalStoreJ</a></em></li>
-    <li><em>Alternative tables for CDS translation</em>. The <a
-      href="menus/alwcalculate.html">Translate as CDNA</a> option now
+      library <em>IntervalStoreJ</em> (available at https://github.com/bartongroup/IntervalStoreJ)</li>
+    <li><strong>Alternative tables for CDS translation</strong>. The <a
+      href="menus/alwcalculate.html">Translate as cDNA</a> option now
       offers alternative amino acid coding schemes.</li>
-    <li><em>PCA plots stored in Jalview Projects</em><br />The <a
+    <li><strong>PCA plots stored in Jalview Projects</strong>. The <a
       href="calculations/pca.html">PCA viewer</a> user interface has
       also been improved.</li>
-    <li><em>Backup files</em><br />Jalview will automatically
+    <li><strong>Backup files</strong>. Jalview will automatically
       create backups when overwriting existing files, and - unlike with
       earlier versions, should Jalview crash during a save, the original
       file will be unaffected. The <a
@@ -98,8 +97,8 @@
     Jalview. Whilst Jalview 2.11 has been in development, we have also
     been working with Prof. Bob Hanson (Jmol and JSmol) to enable
     Jalview to run as both a Java application and a JavaScript app in a
-    web page. To find out more, see the <a
-      href="http://www.jalview.org/jalview-js/">JalviewJS web page</a>.
+    web page. To find out more, open <em>http://www.jalview.org/jalview-js/</em>
+    in Chrome or Firefox.
   </p>
 </body>
 </html>