From: cmzmasek@gmail.com Date: Thu, 24 Feb 2011 07:52:40 +0000 (+0000) Subject: Edited wiki page PhyloBioRuby through web user interface. X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=4fb2be47b1fcf014f2e3f327e69833a458b99c4d;p=jalview.git Edited wiki page PhyloBioRuby through web user interface. --- diff --git a/wiki/PhyloBioRuby.wiki b/wiki/PhyloBioRuby.wiki index 84ef1e9..bfb1c4c 100644 --- a/wiki/PhyloBioRuby.wiki +++ b/wiki/PhyloBioRuby.wiki @@ -15,13 +15,13 @@ Tutorial for multiple sequence alignments and phylogenetic methods in BioRuby -- === MAFFT === -' +{{{ #!/usr/bin/env ruby require 'bio' options = [ '--maxiterate', '1000', '--localpair' ] mafft = Bio::MAFFT.new('/home/zma/SOFTWARE/mafft-6.847-without-extensions/scripts/mafft', options ) report = mafft.query_align( seqs) -' +}}}