From: Charles Ofoegbu <tcnofoegbu@ls29711.local>
Date: Mon, 27 Oct 2014 11:51:29 +0000 (+0000)
Subject: Patch for redundancy removal
X-Git-Tag: Jalview_2_9~155^2~14^2~6
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=5002a0f587ac8f1c18117e29bb4be2754743afc2;p=jalview.git

Patch for redundancy removal
---

diff --git a/src/jalview/gui/RedundancyPanel.java b/src/jalview/gui/RedundancyPanel.java
index 1fcd875..f73e568 100755
--- a/src/jalview/gui/RedundancyPanel.java
+++ b/src/jalview/gui/RedundancyPanel.java
@@ -245,8 +245,7 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
       ap.alignFrame.addHistoryItem(cut);
 
       PaintRefresher.Refresh(this, ap.av.getSequenceSetId(), true, true);
-      // ap.av.firePropertyChange("alignment", null, ap.av.getAlignment()
-      // .getSequences());
+       ap.av.firePropertyChange("alignment", null, ap.av.getAlignment().getSequences());
     }
 
   }
diff --git a/test/jalview/ws/jabaws/MinJabawsClientTests.java b/test/jalview/ws/jabaws/MinJabawsClientTests.java
index a938dd6..b55e8ee 100644
--- a/test/jalview/ws/jabaws/MinJabawsClientTests.java
+++ b/test/jalview/ws/jabaws/MinJabawsClientTests.java
@@ -5,7 +5,6 @@ import static org.junit.Assert.fail;
 
 import java.util.ArrayList;
 import java.util.List;
-import java.util.function.Consumer;
 
 import org.junit.Test;
 
@@ -69,14 +68,11 @@ public class MinJabawsClientTests {
 						"Mismatch in number of input and result sequences - assume alignment service wasn't interacted with correctly",
 						msaservice.getResult(jobid).getSequences().size(),
 						iseqs.size());
-				msaservice.getResult(jobid).getSequences()
-						.forEach(new Consumer<FastaSequence>() {
-							@Override
-							public void accept(FastaSequence t) {
-								System.out.println(">"+t.getId());
-								System.out.println(t.getFormattedFasta());
-							}
-						});
+				List<FastaSequence> seqList = msaservice.getResult(jobid).getSequences();
+				for(FastaSequence fSeq : seqList){
+					System.out.println(">"+fSeq.getId());
+					System.out.println(fSeq.getFormattedFasta());
+				}
 			}
 
 		}