From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 15 Mar 2017 12:47:36 +0000 (+0000)
Subject: JAL-2442 applet feature transparency also on overview or structure
X-Git-Tag: Release_2_10_2~3^2~156
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=53d9a401f21afe1e80e0cee72a964927a15d8ab7;p=jalview.git

JAL-2442 applet feature transparency also on overview or structure
---

diff --git a/src/jalview/appletgui/FeatureSettings.java b/src/jalview/appletgui/FeatureSettings.java
index 2c454a4..1b9fbf9 100755
--- a/src/jalview/appletgui/FeatureSettings.java
+++ b/src/jalview/appletgui/FeatureSettings.java
@@ -696,8 +696,7 @@ public class FeatureSettings extends Panel implements ItemListener,
   public void adjustmentValueChanged(AdjustmentEvent evt)
   {
     fr.setTransparency((100 - transparency.getValue()) / 100f);
-    ap.seqPanel.seqCanvas.repaint();
-
+    ap.paintAlignment(true);
   }
 
   class MyCheckbox extends Checkbox