From: gmungoc Date: Tue, 28 Mar 2017 15:40:38 +0000 (+0100) Subject: JAL-2416 format matrix more readably X-Git-Tag: Release_2_10_2~3^2~105^2~2^2~36 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=59e104c59cd667a8e8f9095d8b37af7f5f36c6f8;hp=e0f478e7dd73384609bd596f7edf6106dc7d9330;p=jalview.git JAL-2416 format matrix more readably --- diff --git a/resources/scoreModel/dna.scm b/resources/scoreModel/dna.scm index c490931..0d7cbc1 100644 --- a/resources/scoreModel/dna.scm +++ b/resources/scoreModel/dna.scm @@ -13,17 +13,15 @@ ScoreMatrix DNA # # Values may be integer or floating point, delimited by tab, space, comma or combinations # - A C G T U I X R Y N - -A 10 -8 -8 -8 -8 1 1 1 -8 1 1 -C -8 10 -8 -8 -8 1 1 -8 1 1 1 -G -8 -8 10 -8 -8 1 1 1 -8 1 1 -T -8 -8 -8 10 10 1 1 -8 1 1 1 -U -8 -8 -8 10 10 1 1 -8 1 1 1 -I 1 1 1 1 1 10 0 0 0 1 1 -X 1 1 1 1 1 0 10 0 0 1 1 -R 1 -8 1 -8 -8 0 0 10 -8 1 1 -Y -8 1 -8 1 1 0 0 -8 10 1 1 -N 1 1 1 1 1 1 1 1 1 10 1 -- 1 1 1 1 1 1 1 1 1 1 1 -# -# A C G T U I X R Y N - + A C G T U I X R Y N - +A 10 -8 -8 -8 -8 1 1 1 -8 1 1 +C -8 10 -8 -8 -8 1 1 -8 1 1 1 +G -8 -8 10 -8 -8 1 1 1 -8 1 1 +T -8 -8 -8 10 10 1 1 -8 1 1 1 +U -8 -8 -8 10 10 1 1 -8 1 1 1 +I 1 1 1 1 1 10 0 0 0 1 1 +X 1 1 1 1 1 0 10 0 0 1 1 +R 1 -8 1 -8 -8 0 0 10 -8 1 1 +Y -8 1 -8 1 1 0 0 -8 10 1 1 +N 1 1 1 1 1 1 1 1 1 10 1 +- 1 1 1 1 1 1 1 1 1 1 1