From: Jim Procter <jprocter@issues.jalview.org>
Date: Tue, 9 May 2017 16:58:27 +0000 (+0100)
Subject: JAL-2509 extend set of brackets recognised by stockholm parser
X-Git-Tag: Release_2_10_2~3^2~88^2~11
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=5edb9a0c935f7c153bbddedfe2ce36bb389dbb53;p=jalview.git

JAL-2509 extend set of brackets recognised by stockholm parser
---

diff --git a/src/jalview/io/StockholmFile.java b/src/jalview/io/StockholmFile.java
index c2726a7..8527f8b 100644
--- a/src/jalview/io/StockholmFile.java
+++ b/src/jalview/io/StockholmFile.java
@@ -78,8 +78,8 @@ public class StockholmFile extends AlignFile
 
   private static final Regex CLOSE_PAREN = new Regex("(>|\\])", ")");
 
-  private static final Regex DETECT_BRACKETS = new Regex(
-          "(<|>|\\[|\\]|\\(|\\))");
+  public static final Regex DETECT_BRACKETS = new Regex(
+          "(<|>|\\[|\\]|\\(|\\)|\\{|\\})");
 
   StringBuffer out; // output buffer