From: Jim Procter <jprocter@issues.jalview.org>
Date: Sat, 5 Sep 2015 17:37:17 +0000 (+0100)
Subject: JAL-1871 reinstate random generation of palette when applying RNA Helices colouring
X-Git-Tag: Release_2_10_0~490
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=60b63ec67604be95d1be4ff04e51c5705b05b109;p=jalview.git

JAL-1871 reinstate random generation of palette when applying RNA Helices colouring
---

diff --git a/src/jalview/schemes/RNAHelicesColour.java b/src/jalview/schemes/RNAHelicesColour.java
index 74cc803..ffc013d 100644
--- a/src/jalview/schemes/RNAHelicesColour.java
+++ b/src/jalview/schemes/RNAHelicesColour.java
@@ -61,12 +61,14 @@ public class RNAHelicesColour extends ResidueColourScheme
   {
     super(ResidueProperties.nucleotideIndex);
     this.annotation = annotation;
+    ColourSchemeProperty.resetRnaHelicesShading();
     refresh();
   }
 
   public RNAHelicesColour(AnnotatedCollectionI alignment)
   {
     super(ResidueProperties.nucleotideIndex);
+    ColourSchemeProperty.resetRnaHelicesShading();
     alignmentChanged(alignment, null);
   }