From: Jim Procter <jprocter@issues.jalview.org>
Date: Tue, 4 Oct 2016 09:56:46 +0000 (+0100)
Subject: JAL-2189 link to feature sorting documentation
X-Git-Tag: Release_2_10_0~21^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=621ec2194c927a3ee8069f3165b2cfd516e3449e;p=jalview.git

JAL-2189 link to feature sorting documentation
---

diff --git a/help/html/calculations/sorting.html b/help/html/calculations/sorting.html
index 5b6f616..afee753 100755
--- a/help/html/calculations/sorting.html
+++ b/help/html/calculations/sorting.html
@@ -82,7 +82,12 @@
         sorting.
       </p>
   </ul>
-  <p>
+  <p><strong>Sorting according to sequence features</strong><br/>
+    Additional sort operations for
+    alignments containing sequence features are provided in the
+    <strong><a href="../features/featuresettings.html#sortbyfeature">Feature
+        Settings</a></strong> dialog, opened via <strong>View&#8594;Feature
+      Settings...</strong><p>
     <strong>Reversing the Order</strong>
   </p>
   <p>Selecting any item from the Sort menu will sort sequences in an
diff --git a/help/html/features/featuresettings.html b/help/html/features/featuresettings.html
index b7738cd..dba62cc 100755
--- a/help/html/features/featuresettings.html
+++ b/help/html/features/featuresettings.html
@@ -82,7 +82,7 @@
     different names associated with a DOMAIN feature).
   </p>
   <p>
-    <strong>Ordering alignment by features</strong><br> The 'Seq
+    <strong><a name="sortbyfeature">Ordering alignment by features</a></strong><br> The 'Seq
     Sort by Score' and 'Seq Sort by Density' buttons will sort the
     alignment based on the average score or total number of currently
     active features and groups on each sequence. To order the alignment