From: Jim Procter Date: Tue, 13 Aug 2019 15:22:01 +0000 (+0100) Subject: Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into merge-212 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=6398c0217546a4d6943f63f670c2684c7c7274be;p=jalview.git Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into merge-212 --- 6398c0217546a4d6943f63f670c2684c7c7274be diff --cc resources/lang/Messages.properties index fdd15cd,ac9ff7a..2647c43 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@@ -1400,7 -1485,4 +1485,7 @@@ label.pca = PC label.create_image_of = Create {0} image of {1} label.click_to_edit = Click to edit, right-click for menu label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu ->>>>>>> develop +label.show_linked_features = Show {0} features +label.on_top = on top +label.include_linked_features = Include {0} features - label.include_linked_tooltip = Include visible {0} features
converted to local sequence coordinates ++label.include_linked_tooltip = Include visible {0} features
converted to local sequence coordinates diff --cc src/jalview/gui/PopupMenu.java index 415054e,8c87aa0..2034b3f --- a/src/jalview/gui/PopupMenu.java +++ b/src/jalview/gui/PopupMenu.java @@@ -31,10 -30,11 +31,11 @@@ import jalview.commands.EditCommand import jalview.commands.EditCommand.Action; import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.AlignmentI; -import jalview.datamodel.Annotation; import jalview.datamodel.DBRefEntry; import jalview.datamodel.HiddenColumns; +import jalview.datamodel.MappedFeatures; import jalview.datamodel.PDBEntry; + import jalview.datamodel.ResidueCount; import jalview.datamodel.SequenceFeature; import jalview.datamodel.SequenceGroup; import jalview.datamodel.SequenceI; diff --cc test/jalview/project/Jalview2xmlTests.java index 5182ad4,b01556c..47b8aea --- a/test/jalview/project/Jalview2xmlTests.java +++ b/test/jalview/project/Jalview2xmlTests.java @@@ -48,9 -49,9 +49,8 @@@ import jalview.datamodel.features.Featu import jalview.datamodel.features.FeatureMatcherSet; import jalview.datamodel.features.FeatureMatcherSetI; import jalview.gui.AlignFrame; - import jalview.gui.AlignViewport; import jalview.gui.AlignmentPanel; import jalview.gui.Desktop; -import jalview.gui.FeatureRenderer; import jalview.gui.JvOptionPane; import jalview.gui.PCAPanel; import jalview.gui.PopupMenu; diff --cc test/jalview/renderer/seqfeatures/FeatureColourFinderTest.java index 6b1fbd2,c0095fe..f488c55 --- a/test/jalview/renderer/seqfeatures/FeatureColourFinderTest.java +++ b/test/jalview/renderer/seqfeatures/FeatureColourFinderTest.java @@@ -10,7 -11,7 +11,8 @@@ import jalview.api.FeatureColourI import jalview.datamodel.SequenceFeature; import jalview.datamodel.SequenceI; import jalview.gui.AlignFrame; +import jalview.gui.AlignViewport; + import jalview.gui.FeatureRenderer; import jalview.io.DataSourceType; import jalview.io.FileLoader; import jalview.schemes.FeatureColour;