From: jprocter <Jim Procter>
Date: Wed, 7 Jan 2009 14:30:07 +0000 (+0000)
Subject: check for features on the retrieved sequences
X-Git-Tag: Release_2_5~360
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=68cc1db37c5222f4f5ef26289313387559ed4c37;p=jalview.git

check for features on the retrieved sequences
---

diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java
index 2ecdc89..64d88af 100755
--- a/src/jalview/gui/SequenceFetcher.java
+++ b/src/jalview/gui/SequenceFetcher.java
@@ -664,7 +664,19 @@ public class SequenceFetcher extends JPanel implements Runnable
         {
           title = "Retrieved from " + database.getSelectedItem();
         }
-
+        SequenceFeature[] sfs=null;
+        for (Enumeration sq=al.getSequences().elements(); sq.hasMoreElements();)
+        {
+          if ((sfs=((SequenceI)sq.nextElement()).getDatasetSequence().getSequenceFeatures())!=null)
+          {
+            if (sfs.length>0)
+            {
+              af.setShowSeqFeatures(true);
+              break;
+            }
+          }
+          
+        }
         Desktop.addInternalFrame(af, title, AlignFrame.DEFAULT_WIDTH,
                 AlignFrame.DEFAULT_HEIGHT);