From: cmzmasek@gmail.com Date: Thu, 24 Feb 2011 08:39:26 +0000 (+0000) Subject: Edited wiki page PhyloBioRuby through web user interface. X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=69e816b09597dc4c6e50bd345a26a469db4830b4;p=jalview.git Edited wiki page PhyloBioRuby through web user interface. --- diff --git a/wiki/PhyloBioRuby.wiki b/wiki/PhyloBioRuby.wiki index c5ab8f9..5b6ac60 100644 --- a/wiki/PhyloBioRuby.wiki +++ b/wiki/PhyloBioRuby.wiki @@ -9,7 +9,7 @@ Tutorial for multiple sequence alignments and phylogenetic methods in !BioRuby - == Reading in a Multiple Sequence Alignments from a File == -... to be done +_... to be done_ {{{ #!/usr/bin/env ruby @@ -20,7 +20,7 @@ require 'bio' == Writing a Multiple Sequence Alignment to a File == -... to be done +_... to be done_ {{{ #!/usr/bin/env ruby @@ -87,7 +87,7 @@ It is probably a good idea to 'clean up' multiple sequence to be used for phylogenetic inference. For instance, columns with more than 50% gaps can be deleted, like so: -*... to be done* +_... to be done_ {{{ #!/usr/bin/env ruby @@ -100,7 +100,7 @@ require 'bio' == Reading and Writing of Phylogenetic Trees == -*... to be done* +_... to be done_ {{{ #!/usr/bin/env ruby @@ -119,7 +119,7 @@ Also, see: https://www.nescent.org/wg_phyloinformatics/BioRuby_PhyloXML_HowTo_do === RAxML === -*... to be done* +_... to be done_ {{{ #!/usr/bin/env ruby @@ -132,7 +132,7 @@ require 'bio' === FastME === -... to be done +_... to be done_ {{{ #!/usr/bin/env ruby @@ -145,7 +145,7 @@ require 'bio' == Gene Duplication Inference == -*Need to further test and then import GSoC 'SDI' work.* +_need to further test and then import GSoC 'SDI' work..._ == Others? == \ No newline at end of file